RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TFPI2P48307 235 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 RND2P52198 227 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 TIGITQ495A1 244 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 NARS2Q96I59 477 aaKnown RBP19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 NDUFA13Q9P0J0 144 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 RYR3Q15413 4870 aa19.63■□□□□ 0.73
CDKN2A-201ENST00000304494 NAP1L6A6NFF2 107 aa19.62■□□□□ 0.73
CDKN2A-201ENST00000304494 SFT2D2O95562 160 aa19.62■□□□□ 0.73
CDKN2A-201ENST00000304494 IGLC1P0CG04 106 aa19.62■□□□□ 0.73
CDKN2A-201ENST00000304494 OR10J1P30954 320 aa19.62■□□□□ 0.73
CDKN2A-201ENST00000304494 ATP5IP56385 69 aaPredicted RBP19.62■□□□□ 0.73
CDKN2A-201ENST00000304494 KIR2DL5BA0A0G2JN68 375 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 KIR2DL5BA0A0G2JPC4 375 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 UBE2CO00762 179 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 SLC25A6P12236 298 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 PPP1R1AQ13522 171 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 BAK1Q16611 211 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 KIR2DL5AQ8N109 375 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 GBGT1Q8N5D6 347 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 KIR2DL5BQ8NHK3 375 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 IL17DQ8TAD2 202 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 Q8WTZ3 238 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 TMED3Q9Y3Q3 217 aa19.61■□□□□ 0.73
CDKN2A-201ENST00000304494 IGHV3-66A0A0C4DH42 116 aa19.6■□□□□ 0.73
CDKN2A-201ENST00000304494 DFFBO76075 338 aa19.6■□□□□ 0.73
CDKN2A-201ENST00000304494 CRYBB3P26998 211 aa19.6■□□□□ 0.73
CDKN2A-201ENST00000304494 UBE2MP61081 183 aaKnown RBP19.6■□□□□ 0.73
CDKN2A-201ENST00000304494 YPEL3P61236 119 aaPredicted RBP19.6■□□□□ 0.73
CDKN2A-201ENST00000304494 RPL11P62913 178 aaKnown RBP19.6■□□□□ 0.73
CDKN2A-201ENST00000304494 ZFAND6Q6FIF0 208 aa19.6■□□□□ 0.73
CDKN2A-201ENST00000304494 TRAV2A0A0B4J234 112 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 DNASE2O00115 360 aaPredicted RBP19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 PITX3O75364 302 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 Q6ZWC4 215 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 LILRB2Q8N423 598 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 NPIPB3Q92617 1050 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 OVOL2Q9BRP0 275 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 MS4A6AQ9H2W1 248 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 TP53TG1Q9Y2A0 90 aa19.59■□□□□ 0.73
CDKN2A-201ENST00000304494 FAM90A26D6RGX4 464 aa19.58■□□□□ 0.72
CDKN2A-201ENST00000304494 IFNA4P05014 189 aa19.58■□□□□ 0.72
CDKN2A-201ENST00000304494 APRG1Q8IVJ8 170 aa19.58■□□□□ 0.72
CDKN2A-201ENST00000304494 STPG3Q8N7X2 389 aa19.58■□□□□ 0.72
CDKN2A-201ENST00000304494 ACY3Q96HD9 319 aa19.58■□□□□ 0.72
CDKN2A-201ENST00000304494 GRAMD2BQ96HH9 432 aa19.58■□□□□ 0.72
CDKN2A-201ENST00000304494 CENPXA8MT69 81 aa19.57■□□□□ 0.72
CDKN2A-201ENST00000304494 MED6O75586 246 aa19.57■□□□□ 0.72
CDKN2A-201ENST00000304494 NDUFB6O95139 128 aa19.57■□□□□ 0.72
CDKN2A-201ENST00000304494 MAP6D1Q9H9H5 199 aa19.57■□□□□ 0.72
CDKN2A-201ENST00000304494 P2RY1P47900 373 aa19.56■□□□□ 0.72
CDKN2A-201ENST00000304494 WFDC3Q8IUB2 231 aa19.56■□□□□ 0.72
CDKN2A-201ENST00000304494 STARD9Q9P2P6 4700 aa19.56■□□□□ 0.72
CDKN2A-201ENST00000304494 CSMD3Q7Z407 3707 aa19.55■□□□□ 0.72
CDKN2A-201ENST00000304494 RPL35AP18077 110 aaKnown RBP19.55■□□□□ 0.72
CDKN2A-201ENST00000304494 GPX4P36969 197 aaPredicted RBP19.55■□□□□ 0.72
CDKN2A-201ENST00000304494 EIF2B2P49770 351 aaKnown RBP19.55■□□□□ 0.72
CDKN2A-201ENST00000304494 SDHCQ99643 169 aaPredicted RBP19.55■□□□□ 0.72
CDKN2A-201ENST00000304494 C7orf50Q9BRJ6 194 aaKnown RBP19.55■□□□□ 0.72
CDKN2A-201ENST00000304494 SPRY2O43597 315 aa19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 TOMM40O96008 361 aa19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 HNRNPCP07910 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 HOXB5P09067 269 aa19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 RD3LP0DJH9 198 aa19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 RAB11AP62491 216 aa19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 CIB3Q96Q77 187 aaPredicted RBP19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 RABAC1Q9UI14 185 aa19.54■□□□□ 0.72
CDKN2A-201ENST00000304494 LINC00854A0A1B0GVQ3 168 aa19.53■□□□□ 0.72
CDKN2A-201ENST00000304494 C9orf170A2RU37 121 aa19.53■□□□□ 0.72
CDKN2A-201ENST00000304494 IL4P05112 153 aa19.53■□□□□ 0.72
CDKN2A-201ENST00000304494 ZNF124Q15973 351 aa19.53■□□□□ 0.72
CDKN2A-201ENST00000304494 DEFB135Q30KP9 77 aa19.53■□□□□ 0.72
CDKN2A-201ENST00000304494 SLC35E1Q96K37 410 aa19.53■□□□□ 0.72
CDKN2A-201ENST00000304494 IAPPP10997 89 aa19.52■□□□□ 0.72
CDKN2A-201ENST00000304494 IL7P13232 177 aa19.52■□□□□ 0.72
CDKN2A-201ENST00000304494 RPP30P78346 268 aaKnown RBP19.52■□□□□ 0.72
CDKN2A-201ENST00000304494 GGNBP1Q5YKI7 109 aa19.52■□□□□ 0.72
CDKN2A-201ENST00000304494 STXBP6Q8NFX7 210 aa19.52■□□□□ 0.72
CDKN2A-201ENST00000304494 U3KQE9 123 aa19.52■□□□□ 0.72
CDKN2A-201ENST00000304494 HELTA6NFD8 242 aa19.51■□□□□ 0.71
CDKN2A-201ENST00000304494 GAMTQ14353 236 aa19.51■□□□□ 0.71
CDKN2A-201ENST00000304494 USF2Q15853 346 aaPredicted RBP19.51■□□□□ 0.71
CDKN2A-201ENST00000304494 COQ8AQ8NI60 647 aa19.51■□□□□ 0.71
CDKN2A-201ENST00000304494 RNF183Q96D59 192 aa19.51■□□□□ 0.71
CDKN2A-201ENST00000304494 CSTL1Q9H114 145 aa19.51■□□□□ 0.71
CDKN2A-201ENST00000304494 ZFP92A6NM28 416 aa19.5■□□□□ 0.71
CDKN2A-201ENST00000304494 SYNGR2O43760 224 aa19.5■□□□□ 0.71
CDKN2A-201ENST00000304494 OR4E1P0C645 316 aa19.5■□□□□ 0.71
CDKN2A-201ENST00000304494 AP2S1P53680 142 aaPredicted RBP19.5■□□□□ 0.71
CDKN2A-201ENST00000304494 DEFB131AP59861 70 aa19.5■□□□□ 0.71
CDKN2A-201ENST00000304494 CNPY1Q3B7I2 92 aa19.5■□□□□ 0.71
CDKN2A-201ENST00000304494 FLVCR2Q9UPI3 526 aa19.5■□□□□ 0.71
CDKN2A-201ENST00000304494 MPTX1A8MV57 137 aa19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 K7EQG2 157 aa19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 FABP1P07148 127 aa19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 PSG1P11464 419 aa19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 DHRS2Q13268 280 aa19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 C16orf54Q6UWD8 224 aa19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 OR51G1Q8NGK1 321 aa19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 PAIP2BQ9ULR5 123 aaKnown RBP19.49■□□□□ 0.71
CDKN2A-201ENST00000304494 BTCP35070 178 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms