RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CRPP02741 224 aa12.4□□□□□ -0.43
SCN3B-201ENST00000299333 LINC00158P58513 81 aa12.4□□□□□ -0.43
SCN3B-201ENST00000299333 DEFB104AQ8WTQ1 72 aa12.4□□□□□ -0.43
SCN3B-201ENST00000299333 TOMM40O96008 361 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 SMIM10L1P0DMW3 83 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 SMIM10Q96HG1 83 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 LY75O60449 1722 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 ICE1Q9Y2F5 2266 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 TRBV6-7A0A0A0MS04 114 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 IFI6P09912 130 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 CCL1P22362 96 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 CYTL1Q9NRR1 136 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 K7EP13 123 aa12.39□□□□□ -0.43
SCN3B-201ENST00000299333 MCRIP2Q9BUT9 160 aaKnown RBP12.39□□□□□ -0.43
SCN3B-201ENST00000299333 ID3Q02535 119 aa12.38□□□□□ -0.43
SCN3B-201ENST00000299333 LCNL1Q6ZST4 164 aa12.38□□□□□ -0.43
SCN3B-201ENST00000299333 SPTBP11277 2137 aa12.38□□□□□ -0.43
SCN3B-201ENST00000299333 C15orf61A6NNL5 157 aa12.38□□□□□ -0.43
SCN3B-201ENST00000299333 UPK2O00526 184 aa12.38□□□□□ -0.43
SCN3B-201ENST00000299333 KLF17Q5JT82 389 aaPredicted RBP12.38□□□□□ -0.43
SCN3B-201ENST00000299333 LAMTOR3Q9UHA4 124 aa12.38□□□□□ -0.43
SCN3B-201ENST00000299333 SAA2-SAA4A0A096LPE2 208 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 TCRBV4S1A1TA0A5B7 111 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 SAA2P0DJI9 122 aaPredicted RBP12.37□□□□□ -0.43
SCN3B-201ENST00000299333 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
SCN3B-201ENST00000299333 HTN3P15516 51 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 CDKN1BP46527 198 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 PDLIM4P50479 330 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
SCN3B-201ENST00000299333 LINC01551Q86U37 167 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
SCN3B-201ENST00000299333 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 RNF115Q9Y4L5 304 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 RNF125Q96EQ8 232 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 ARFGEF1Q9Y6D6 1849 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 TM4SF5O14894 197 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 ETDBQ3ZM63 59 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 TMEM86BQ8N661 226 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 BMPERQ8N8U9 685 aa12.37□□□□□ -0.43
SCN3B-201ENST00000299333 SYS1-DBNDD2H3BUS1 97 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 COX6A1P12074 109 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 CSRP3P50461 194 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 OR9G9P0C7N8 305 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 FAM90A2PQ658T7 463 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 H3BMM0 161 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 UBE2WQ96B02 151 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 RFNGQ9Y644 331 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 MIA3Q5JRA6 1907 aa12.36□□□□□ -0.43
SCN3B-201ENST00000299333 J3QW42 95 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 ANKRD29Q8N6D5 301 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 SLC50A1Q9BRV3 221 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 IGKV1D-8A0A087WSZ0 117 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 PRB3Q04118 309 aaPredicted RBP12.35□□□□□ -0.43
SCN3B-201ENST00000299333 MRPL23Q16540 153 aaKnown RBP12.35□□□□□ -0.43
SCN3B-201ENST00000299333 PPDPFLQ8WWR9 84 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 SPANXCQ9NY87 97 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 ZNF319Q9P2F9 582 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 A0A1B0GW64 132 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 F2Z2F3 143 aa12.35□□□□□ -0.43
SCN3B-201ENST00000299333 CELA3AP09093 270 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 WNT2P09544 360 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 SLC25A48Q6ZT89 311 aaKnown RBP12.34□□□□□ -0.43
SCN3B-201ENST00000299333 MRPL55Q7Z7F7 128 aaKnown RBP12.34□□□□□ -0.43
SCN3B-201ENST00000299333 KLHDC3Q9BQ90 382 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 EFEMP2O95967 443 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 ZNF138P52744 262 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 C1QTNF5Q9BXJ0 243 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 PVRIGQ6DKI7 326 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 A0A0A6YYD4 124 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 PF4P02776 101 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
SCN3B-201ENST00000299333 HGFACQ04756 655 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 DUX4L9Q6RFH8 374 aaPredicted RBP12.34□□□□□ -0.43
SCN3B-201ENST00000299333 SCN8AQ9UQD0 1980 aa12.34□□□□□ -0.43
SCN3B-201ENST00000299333 PAX4O43316 350 aa12.33□□□□□ -0.43
SCN3B-201ENST00000299333 FOXH1O75593 365 aa12.33□□□□□ -0.43
SCN3B-201ENST00000299333 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.43
SCN3B-201ENST00000299333 POLR3KQ9Y2Y1 108 aaPredicted RBP12.33□□□□□ -0.43
SCN3B-201ENST00000299333 CABIN1Q9Y6J0 2220 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 PCOLCEQ15113 449 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 TREML4Q6UXN2 200 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.44
SCN3B-201ENST00000299333 GFI1Q99684 422 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 JPT2Q9H910 190 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 MDC1Q14676 2089 aaKnown RBP12.33□□□□□ -0.44
SCN3B-201ENST00000299333 TCRAP04437 139 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 RFPL3SP0C7P2 107 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 RPRMLQ8N4K4 120 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 SCN4AP35499 1836 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 TFF1P04155 84 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 CECR9P0C854 216 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 OTOFQ9HC10 1997 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 QSER1Q2KHR3 1735 aa12.33□□□□□ -0.44
SCN3B-201ENST00000299333 ADARB2-AS1A8MUL3 147 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms