RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SPTAN1Q13813 2472 aaKnown RBP10.16□□□□□ -0.78
PCF11-201ENST00000298281 COX6A1P12074 109 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 DLEC1Q9Y238 1755 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 PRB4P10163 310 aaPredicted RBP10.16□□□□□ -0.78
PCF11-201ENST00000298281 EGR4Q05215 589 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 C2orf68Q2NKX9 166 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 EPDR1Q9UM22 224 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 FCN3O75636 299 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
PCF11-201ENST00000298281 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
PCF11-201ENST00000298281 TPTE2P1Q5T6R2 138 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 PPIFP30405 207 aaKnown RBP10.16□□□□□ -0.78
PCF11-201ENST00000298281 DSCR8Q96T75 97 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 OVOL2Q9BRP0 275 aa10.16□□□□□ -0.78
PCF11-201ENST00000298281 H3BUT2 72 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 SVIPQ8NHG7 77 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 UBE2E2Q96LR5 201 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 XIRP1Q702N8 1843 aaKnown RBP10.15□□□□□ -0.78
PCF11-201ENST00000298281 SLC17A3O00476 420 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 CELA2AP08217 269 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 COL18A1P39060 1754 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 GCM2O75603 506 aaPredicted RBP10.15□□□□□ -0.78
PCF11-201ENST00000298281 EFEMP2O95967 443 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 CD300CQ08708 224 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 GLIPR1P48060 266 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 APCDD1LQ8NCL9 501 aa10.15□□□□□ -0.78
PCF11-201ENST00000298281 MSGN1A6NI15 193 aa10.15□□□□□ -0.79
PCF11-201ENST00000298281 GCHFRP30047 84 aa10.15□□□□□ -0.79
PCF11-201ENST00000298281 RND3P61587 244 aa10.15□□□□□ -0.79
PCF11-201ENST00000298281 UBE2BP63146 152 aa10.15□□□□□ -0.79
PCF11-201ENST00000298281 C2orf82Q6UX34 121 aa10.15□□□□□ -0.79
PCF11-201ENST00000298281 GTSF1LQ9H1H1 148 aa10.15□□□□□ -0.79
PCF11-201ENST00000298281 C5orf66Q9H5L9 145 aa10.15□□□□□ -0.79
PCF11-201ENST00000298281 F5H768 121 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 BSPH1Q075Z2 132 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 FAM19A2Q8N3H0 131 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 ZNF831Q5JPB2 1677 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 ID3Q02535 119 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 FAM90A1Q86YD7 464 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 CACNG8Q8WXS5 425 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 ABHD17AQ96GS6 310 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 Q9H3A6 140 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 ZNF883P0CG24 379 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 UCP1P25874 307 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 TMEM256Q8N2U0 113 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 DRAM1Q8N682 238 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 DEFB105AQ8NG35 78 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 OR5P3Q8WZ94 311 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 TRAV8-3A0A0A6YYJ7 113 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 TRAV12-1A0A0B4J245 112 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 C1QL1O75973 258 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 CTHRC1Q96CG8 243 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 SMIM10L1P0DMW3 83 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 EIF4EBP2Q13542 120 aaPredicted RBP10.14□□□□□ -0.79
PCF11-201ENST00000298281 ACTL10Q5JWF8 245 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 SMIM10Q96HG1 83 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 RPL36AP83881 106 aaKnown RBP10.14□□□□□ -0.79
PCF11-201ENST00000298281 NR2C2APQ86WQ0 139 aa10.14□□□□□ -0.79
PCF11-201ENST00000298281 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
PCF11-201ENST00000298281 RPL36ALQ969Q0 106 aaKnown RBP10.14□□□□□ -0.79
PCF11-201ENST00000298281 HIGD1CA8MV81 97 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 FABP5P3A8MUU1 101 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 GATA4P43694 442 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 ASCL2Q99929 193 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 TMEM14DPA8MWL7 114 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 SP9P0CG40 484 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 TMEM187Q14656 261 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 TMEM238C9JI98 176 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 E9PQ18 207 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 ORMDL2Q53FV1 153 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 C5orf30Q96GV9 206 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 TRAV9-1A0A075B6T8 112 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 CGAP01215 116 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 CDKN1AP38936 164 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 PRDM13Q9H4Q3 707 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 MPTX1A8MV57 137 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 ZP1P60852 638 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 CD300EQ496F6 205 aaPredicted RBP10.13□□□□□ -0.79
PCF11-201ENST00000298281 KLHL30-AS1Q8NEE0 82 aa10.13□□□□□ -0.79
PCF11-201ENST00000298281 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 CD24P25063 80 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 DDTP30046 118 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 ADMP35318 185 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 RFLNBQ8N5W9 214 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 FBLIM1Q8WUP2 373 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 AMELYQ99218 206 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 WNK1Q9H4A3 2382 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 SIPA1L3O60292 1781 aaPredicted RBP10.12□□□□□ -0.79
PCF11-201ENST00000298281 H0YL77 283 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
PCF11-201ENST00000298281 C1QL2Q7Z5L3 287 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 COLQQ9Y215 455 aaPredicted RBP10.12□□□□□ -0.79
PCF11-201ENST00000298281 SIGLEC15Q6ZMC9 328 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 CIARTQ8N365 385 aaPredicted RBP10.12□□□□□ -0.79
PCF11-201ENST00000298281 RGPD3A6NKT7 1758 aaPredicted RBP10.12□□□□□ -0.79
PCF11-201ENST00000298281 CDCP2Q5VXM1 449 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms