RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 VSIRQ9H7M9 311 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 AGPAT2O15120 278 aa14.71□□□□□ -0.05
PDLIM3-202ENST00000284770 CAMLGP49069 296 aa14.71□□□□□ -0.05
PDLIM3-202ENST00000284770 BLOC1S1P78537 153 aa14.71□□□□□ -0.05
PDLIM3-202ENST00000284770 ATP5G2Q06055 141 aa14.71□□□□□ -0.05
PDLIM3-202ENST00000284770 USMG5Q96IX5 58 aa14.71□□□□□ -0.05
PDLIM3-202ENST00000284770 C21orf62Q9NYP8 219 aa14.71□□□□□ -0.05
PDLIM3-202ENST00000284770 S4R3C0 116 aa14.71□□□□□ -0.05
PDLIM3-202ENST00000284770 ATP6V1G1O75348 118 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 ELANEP08246 267 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 MFAP4P55083 255 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 SRSF2Q01130 221 aaKnown RBP14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 FOXE3Q13461 319 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 DPPA3Q6W0C5 159 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 LYPD6BQ8NI32 183 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 RPRMQ9NS64 109 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 NF1P21359 2839 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 FCGR2BP31994 310 aaPredicted RBP14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 NPBWR1P48145 328 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 ELLP55199 621 aaPredicted RBP14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 RAB31Q13636 194 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 LCNL1Q6ZST4 164 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 COMMD1Q8N668 190 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 KLHDC1Q8N7A1 406 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 THAP8Q8NA92 274 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 OR4F5Q8NH21 305 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 FAM213BQ8TBF2 198 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 TXN2Q99757 166 aa14.7□□□□□ -0.06
PDLIM3-202ENST00000284770 A0A0G2JLM5 398 aa14.69□□□□□ -0.06
PDLIM3-202ENST00000284770 CLN5O75503 358 aa14.69□□□□□ -0.06
PDLIM3-202ENST00000284770 TMEM41BQ5BJD5 291 aa14.69□□□□□ -0.06
PDLIM3-202ENST00000284770 RNF152Q8N8N0 203 aa14.69□□□□□ -0.06
PDLIM3-202ENST00000284770 ZNF502Q8TBZ5 544 aa14.69□□□□□ -0.06
PDLIM3-202ENST00000284770 EEF1AKMT3Q96AZ1 226 aa14.69□□□□□ -0.06
PDLIM3-202ENST00000284770 IGKV1D-37A0A075B6S9 117 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 TRBV7-1A0A0A6YYK4 115 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 F8W735 103 aaPredicted RBP14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 TEX46H3BTG2 121 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 IGHV3-23P01764 117 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 FFAR4Q5NUL3 377 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 COMMD7Q86VX2 200 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 OR5AU1Q8NGC0 362 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 SLC45A2Q9UMX9 530 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 ZFP92A6NM28 416 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 OR10J1P30954 320 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 RPL29P47914 159 aaKnown RBP14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 RAB2AP61019 212 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 PRR20EP86478 221 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 PRR20CP86479 221 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 PRR20DP86480 221 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 PRR20BP86481 221 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 PRR20AP86496 221 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 ZNF616Q08AN1 781 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 Q56UQ5 140 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 MIC13Q5XKP0 118 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 WIPF2Q8TF74 440 aaPredicted RBP14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 KCNIP2Q9NS61 270 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 PXMP4Q9Y6I8 212 aa14.68□□□□□ -0.06
PDLIM3-202ENST00000284770 TEP1Q99973 2627 aaKnown RBP14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 TRAV30A0A087WSZ9 112 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 GNG7O60262 68 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 YIF1AO95070 293 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 MBP02144 154 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 IGLC1P0CG04 106 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 KIAA0141Q14154 515 aaPredicted RBP14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 ZNF726P1Q15940 193 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 RPP25LQ8N5L8 163 aaKnown RBP14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 CCDC140Q96MF4 163 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 ATP6V0BQ99437 205 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 TRGV9Q99603 122 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 HRH4Q9H3N8 390 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 PFDN2Q9UHV9 154 aa14.67□□□□□ -0.06
PDLIM3-202ENST00000284770 TCRBV4S1A1TA0A5B7 111 aa14.66□□□□□ -0.06
PDLIM3-202ENST00000284770 RPLP1P05386 114 aaKnown RBP14.66□□□□□ -0.06
PDLIM3-202ENST00000284770 LINC00869P0C866 280 aa14.66□□□□□ -0.06
PDLIM3-202ENST00000284770 STPG3Q8N7X2 389 aa14.66□□□□□ -0.06
PDLIM3-202ENST00000284770 MYOZ3Q8TDC0 251 aa14.66□□□□□ -0.06
PDLIM3-202ENST00000284770 GAR1Q9NY12 217 aaKnown RBP14.66□□□□□ -0.06
PDLIM3-202ENST00000284770 NIPBLQ6KC79 2804 aaeCLIP14.66□□□□□ -0.06
PDLIM3-202ENST00000284770 CLPSL1A2RUU4 121 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 OR2T8A6NH00 312 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 TSPAN15O95858 294 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 CLEC3BP05452 202 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 M6PRP20645 277 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 B2MP61769 119 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 SSX7Q7RTT5 188 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 ZNF491Q8N8L2 437 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 RCC1LQ96I51 464 aaKnown RBP14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 RNF114Q9Y508 228 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 IGKV1-17P01599 117 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 CTSGP08311 255 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 ZNF90Q03938 601 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 ACOT6Q3I5F7 207 aaPredicted RBP14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 GCSAMLQ5JQS6 135 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 CLEC19AQ6UXS0 136 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 CYP2G1PQ6ZSU1 146 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 OR4X2Q8NGF9 303 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 OR10G4Q8NGN3 311 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 OR10G9Q8NGN4 311 aa14.65□□□□□ -0.06
PDLIM3-202ENST00000284770 OR10G7Q8NGN6 311 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms