RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 HIST2H2BCQ6DN03 193 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 SGMS2Q8NHU3 365 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 DNAJC4Q9NNZ3 241 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 MOB4Q9Y3A3 225 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 ZFHX3Q15911 3703 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 BAHCC1Q9P281 2608 aa17.39■□□□□ 0.37
CCDC7-201ENST00000277657 TGFAP01135 160 aa17.38■□□□□ 0.37
CCDC7-201ENST00000277657 RNF2Q99496 336 aa17.38■□□□□ 0.37
CCDC7-201ENST00000277657 MRPL32Q9BYC8 188 aaKnown RBP17.38■□□□□ 0.37
CCDC7-201ENST00000277657 DNASE2O00115 360 aaPredicted RBP17.37■□□□□ 0.37
CCDC7-201ENST00000277657 IGLC1P0CG04 106 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 GCHFRP30047 84 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 CEBPGP53567 150 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 TMEM219Q86XT9 240 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 OR1L4Q8NGR5 311 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 PFDN5Q99471 154 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 TECRQ9NZ01 308 aaKnown RBP17.37■□□□□ 0.37
CCDC7-201ENST00000277657 PATE2Q6UY27 113 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 Q96MF0 132 aa17.37■□□□□ 0.37
CCDC7-201ENST00000277657 ZANQ9Y493 2812 aa17.36■□□□□ 0.37
CCDC7-201ENST00000277657 TMEM250H0YL14 139 aa17.36■□□□□ 0.37
CCDC7-201ENST00000277657 AMY1AP04745 511 aa17.36■□□□□ 0.37
CCDC7-201ENST00000277657 BPIFB3P59826 476 aa17.36■□□□□ 0.37
CCDC7-201ENST00000277657 KLK9Q2XQG4 91 aa17.36■□□□□ 0.37
CCDC7-201ENST00000277657 KLK9Q9UKQ9 250 aa17.36■□□□□ 0.37
CCDC7-201ENST00000277657 FAM74A7A6NL05 159 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 ATP6V0E1O15342 81 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 COX7A2P2O60397 106 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 CLN5O75503 358 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 FAM74A3Q4VXF1 159 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 GSX1Q9H4S2 264 aaPredicted RBP17.35■□□□□ 0.37
CCDC7-201ENST00000277657 A6NDX4 124 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 H3BQ15 152 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 TAS2R45P59539 299 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 AWAT1Q58HT5 328 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 C10orf113Q5VZT2 155 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 PQLC2Q6ZP29 291 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 OR5T1Q8NG75 326 aa17.35■□□□□ 0.37
CCDC7-201ENST00000277657 FAM110DQ8TAY7 271 aaPredicted RBP17.35■□□□□ 0.37
CCDC7-201ENST00000277657 PUS1Q9Y606 427 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCDC7-201ENST00000277657 ELOA3CA0A087WX78 387 aaPredicted RBP17.34■□□□□ 0.37
CCDC7-201ENST00000277657 C11orf94C9JXX5 98 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 C8orf88P0DMB2 117 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 PLP1P60201 277 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 OR4F5Q8NH21 305 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 ZNF503Q96F45 646 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 TMEM68Q96MH6 324 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 ZNF48Q96MX3 618 aaPredicted RBP17.34■□□□□ 0.37
CCDC7-201ENST00000277657 OR4F4Q96R69 305 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 DOK5Q9P104 306 aa17.34■□□□□ 0.37
CCDC7-201ENST00000277657 FASNP49327 2511 aaKnown RBP17.34■□□□□ 0.37
CCDC7-201ENST00000277657 H3BUX3 64 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 IGKV1-17P01599 117 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 UBE2G2P60604 165 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 MORN5Q5VZ52 161 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 FAM167A-AS1Q96KT0 104 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 TXNDC17Q9BRA2 123 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 NIPSNAP3BQ9BS92 247 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 THYN1Q9P016 225 aa17.33■□□□□ 0.37
CCDC7-201ENST00000277657 SH2D7A6NKC9 451 aaPredicted RBP17.33■□□□□ 0.36
CCDC7-201ENST00000277657 LINC01548A6NM66 108 aa17.33■□□□□ 0.36
CCDC7-201ENST00000277657 AKIRIN2Q53H80 203 aa17.33■□□□□ 0.36
CCDC7-201ENST00000277657 UNQ5815/PRO19632Q6UWF5 114 aa17.33■□□□□ 0.36
CCDC7-201ENST00000277657 SUN5Q8TC36 379 aa17.33■□□□□ 0.36
CCDC7-201ENST00000277657 TMUB1Q9BVT8 246 aa17.33■□□□□ 0.36
CCDC7-201ENST00000277657 PRRC2AP48634 2157 aaKnown RBP17.32■□□□□ 0.36
CCDC7-201ENST00000277657 M0R036 132 aa17.32■□□□□ 0.36
CCDC7-201ENST00000277657 FSHBP01225 129 aa17.32■□□□□ 0.36
CCDC7-201ENST00000277657 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.32■□□□□ 0.36
CCDC7-201ENST00000277657 SLC25A2Q9BXI2 301 aa17.32■□□□□ 0.36
CCDC7-201ENST00000277657 TMEM167BQ9NRX6 74 aa17.32■□□□□ 0.36
CCDC7-201ENST00000277657 ARL2-SNX15V9GYD0 113 aa17.32■□□□□ 0.36
CCDC7-201ENST00000277657 CSPG4Q6UVK1 2322 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 C7orf77A4D0Y5 90 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 PSG1P11464 419 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 HIST1H1BP16401 226 aaKnown RBP17.31■□□□□ 0.36
CCDC7-201ENST00000277657 ATP5G3P48201 142 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 ECSCRQ19T08 205 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 TIGITQ495A1 244 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 CST9LP1Q5W188 147 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 C20orf24Q9BUV8 137 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 YTHDF2Q9Y5A9 579 aaKnown RBP17.31■□□□□ 0.36
CCDC7-201ENST00000277657 CREBBPQ92793 2442 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 NUPL2O15504 423 aaKnown RBP17.31■□□□□ 0.36
CCDC7-201ENST00000277657 PDE6DO43924 150 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 NDUFB8O95169 186 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 CRIP2P52943 208 aaPredicted RBP17.31■□□□□ 0.36
CCDC7-201ENST00000277657 MFAP4P55083 255 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 RHEBQ15382 184 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 TMEM88Q6PEY1 159 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 TVP23CQ96ET8 276 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 UHRF2Q96PU4 802 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 ZNF355PQ9NSJ1 428 aa17.31■□□□□ 0.36
CCDC7-201ENST00000277657 F8W735 103 aaPredicted RBP17.3■□□□□ 0.36
CCDC7-201ENST00000277657 OR7C2O60412 319 aa17.3■□□□□ 0.36
CCDC7-201ENST00000277657 ORM2P19652 201 aa17.3■□□□□ 0.36
CCDC7-201ENST00000277657 LY6EQ16553 131 aa17.3■□□□□ 0.36
CCDC7-201ENST00000277657 LINC00305Q7Z4B0 112 aa17.3■□□□□ 0.36
CCDC7-201ENST00000277657 CBLN2Q8IUK8 224 aa17.3■□□□□ 0.36
CCDC7-201ENST00000277657 OR1B1Q8NGR6 318 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms