RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ST8SIA2Q92186 375 aa16.02■□□□□ 0.15
RTCA-201ENST00000260563 ACY3Q96HD9 319 aa16.02■□□□□ 0.15
RTCA-201ENST00000260563 OR5B12Q96R08 314 aa16.02■□□□□ 0.15
RTCA-201ENST00000260563 MRPL36Q9P0J6 103 aaKnown RBP16.02■□□□□ 0.15
RTCA-201ENST00000260563 WDR83OSQ9Y284 106 aa16.02■□□□□ 0.15
RTCA-201ENST00000260563 M0QZ24 198 aa16.01■□□□□ 0.15
RTCA-201ENST00000260563 LGALS1P09382 135 aaKnown RBP16.01■□□□□ 0.15
RTCA-201ENST00000260563 ACSM6Q6P461 480 aa16.01■□□□□ 0.15
RTCA-201ENST00000260563 TMEM144Q7Z5S9 345 aa16.01■□□□□ 0.15
RTCA-201ENST00000260563 ARV1Q9H2C2 271 aa16.01■□□□□ 0.15
RTCA-201ENST00000260563 MFSD2BA6NFX1 497 aa16■□□□□ 0.15
RTCA-201ENST00000260563 FGF7P21781 194 aa16■□□□□ 0.15
RTCA-201ENST00000260563 RND2P52198 227 aa16■□□□□ 0.15
RTCA-201ENST00000260563 TEPPQ6URK8 271 aa16■□□□□ 0.15
RTCA-201ENST00000260563 BTNL8Q6UX41 500 aa16■□□□□ 0.15
RTCA-201ENST00000260563 BAP18Q8IXM2 172 aa16■□□□□ 0.15
RTCA-201ENST00000260563 HSD17B11Q8NBQ5 300 aa16■□□□□ 0.15
RTCA-201ENST00000260563 TMEM116Q8NCL8 245 aa16■□□□□ 0.15
RTCA-201ENST00000260563 VN1R17PQ8TDU5 208 aa16■□□□□ 0.15
RTCA-201ENST00000260563 NPIPB3Q92617 1050 aa16■□□□□ 0.15
RTCA-201ENST00000260563 CXorf58Q96LI9 332 aa16■□□□□ 0.15
RTCA-201ENST00000260563 GINS3Q9BRX5 216 aa16■□□□□ 0.15
RTCA-201ENST00000260563 LSM4Q9Y4Z0 139 aaKnown RBP16■□□□□ 0.15
RTCA-201ENST00000260563 OR4F17Q8NGA8 305 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 OR4X1Q8NH49 305 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 EEF1AKMT3Q96AZ1 226 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 OR4F4Q96R69 305 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 C21orf62Q9NYP8 219 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 S4R3C0 116 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 I3L521 148 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 MPDU1O75352 247 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 RUNX1Q01196 453 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 DEFB136Q30KP8 78 aa15.99■□□□□ 0.15
RTCA-201ENST00000260563 DNHD1Q96M86 4753 aa15.98■□□□□ 0.15
RTCA-201ENST00000260563 IGKV1OR2-108A0A075B7D4 117 aa15.98■□□□□ 0.15
RTCA-201ENST00000260563 ATP6V0CP27449 155 aa15.98■□□□□ 0.15
RTCA-201ENST00000260563 MFAP4P55083 255 aa15.98■□□□□ 0.15
RTCA-201ENST00000260563 ZNF343Q6P1L6 599 aa15.98■□□□□ 0.15
RTCA-201ENST00000260563 MGST2Q99735 147 aa15.98■□□□□ 0.15
RTCA-201ENST00000260563 NPCDR1Q9BY65 106 aa15.98■□□□□ 0.15
RTCA-201ENST00000260563 CLN5O75503 358 aa15.97■□□□□ 0.15
RTCA-201ENST00000260563 IGHV3-23P01764 117 aa15.97■□□□□ 0.15
RTCA-201ENST00000260563 NPBWR1P48145 328 aa15.97■□□□□ 0.15
RTCA-201ENST00000260563 FAM209BQ5JX69 171 aa15.97■□□□□ 0.15
RTCA-201ENST00000260563 THAP8Q8NA92 274 aa15.97■□□□□ 0.15
RTCA-201ENST00000260563 ZNF502Q8TBZ5 544 aa15.97■□□□□ 0.15
RTCA-201ENST00000260563 GNPNAT1Q96EK6 184 aaPredicted RBP15.97■□□□□ 0.15
RTCA-201ENST00000260563 RSG1Q9BU20 258 aa15.97■□□□□ 0.15
RTCA-201ENST00000260563 TRBV7-1A0A0A6YYK4 115 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 CFDP00746 253 aaPredicted RBP15.96■□□□□ 0.15
RTCA-201ENST00000260563 PF4P02776 101 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 FCGR2BP31994 310 aaPredicted RBP15.96■□□□□ 0.15
RTCA-201ENST00000260563 RAB31Q13636 194 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 Q56UQ5 140 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 TEX261Q6UWH6 196 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 OR11H1Q8NG94 326 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 TXN2Q99757 166 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 SH3BGRL3Q9H299 93 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 TRRAPQ9Y4A5 3859 aa15.96■□□□□ 0.15
RTCA-201ENST00000260563 IGKV1D-37A0A075B6S9 117 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 ANKRD34BA5PLL1 514 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 ZFP92A6NM28 416 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 C17orf112F2Z3M2 114 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 F8W735 103 aaPredicted RBP15.95■□□□□ 0.14
RTCA-201ENST00000260563 AGPAT2O15120 278 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 TSPAN15O95858 294 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 SPP1P10451 314 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 CAMLGP49069 296 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 ZNF709Q8N972 641 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 PHYHIPLQ96FC7 376 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 RAX2Q96IS3 184 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 CCDC140Q96MF4 163 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 SLC25A32Q9H2D1 315 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 TIMM9Q9Y5J7 89 aa15.95■□□□□ 0.14
RTCA-201ENST00000260563 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.94■□□□□ 0.14
RTCA-201ENST00000260563 GNG7O60262 68 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 IGLC1P0CG04 106 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 OR10J1P30954 320 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 IFITM2Q01629 132 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 EIF5AL1Q6IS14 154 aaKnown RBP15.94■□□□□ 0.14
RTCA-201ENST00000260563 DPF1Q92782 380 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 DUX3Q96PT4 197 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 PSMG3Q9BT73 122 aaPredicted RBP15.94■□□□□ 0.14
RTCA-201ENST00000260563 GGTLC1Q9BX51 225 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 PEF1Q9UBV8 284 aaKnown RBP15.94■□□□□ 0.14
RTCA-201ENST00000260563 RFNGQ9Y644 331 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 WNK1Q9H4A3 2382 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 IGHV4OR15-8A0A075B7B6 117 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 TRAV30A0A087WSZ9 112 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 A0A087WW49 117 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 CCL24O00175 119 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 HSPB1P04792 205 aaKnown RBP15.94■□□□□ 0.14
RTCA-201ENST00000260563 SEC11BP0C7V7 166 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 MYCNOSP40205 109 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 ZNF616Q08AN1 781 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 CLEC19AQ6UXS0 136 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 OR1N2Q8NGR9 330 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 TMED6Q8WW62 240 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 TRGV9Q99603 122 aa15.94■□□□□ 0.14
RTCA-201ENST00000260563 OR2T8A6NH00 312 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms