RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ALKBH7Q9BT30 221 aaPredicted RBP15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 ZNF581Q9P0T4 197 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 SOX21Q9Y651 276 aaPredicted RBP15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 PSMG4Q5JS54 123 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 LINC00518Q8N0U6 118 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 ORMDL3Q8N138 153 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 C8orf46Q8TAG6 207 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 HOXA5P20719 270 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 TMEM200BQ69YZ2 307 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 CIARTQ8N365 385 aaPredicted RBP15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 OTORQ9NRC9 128 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 IGKV2-40A0A087WW87 121 aaPredicted RBP15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 TRAV12-3A0A0B4J271 114 aa15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 IGKV2D-40P01614 121 aaPredicted RBP15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 NDPQ00604 133 aa15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 SERF1AO75920 110 aa15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 IZUMO1RA6ND01 250 aa15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 SPATA31B1PQ5VZV4 182 aa15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 NEUROG1Q92886 237 aa15.46■□□□□ 0.07
SMARCC1-201ENST00000254480 TRAV3A0A0B4J244 114 aa15.46■□□□□ 0.06
SMARCC1-201ENST00000254480 NPIPB5A8MRT5 1133 aa15.46■□□□□ 0.06
SMARCC1-201ENST00000254480 TSPAN13O95857 204 aa15.46■□□□□ 0.06
SMARCC1-201ENST00000254480 IGHV2-26A0A0B4J1V2 119 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 FABP5P3A8MUU1 101 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 CRYGSP22914 178 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 EPDR1Q9UM22 224 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 IGLV3-32A0A0A0MS00 114 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 EFNB3Q15768 340 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 MALP21145 153 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 NABP1Q96AH0 204 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 ASCL2Q99929 193 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 CCL1P22362 96 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 IGFL4Q6B9Z1 124 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 DOCK10Q96BY6 2186 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 A0A0G2JNJ9 132 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 Q9UFV3 132 aa15.45■□□□□ 0.06
SMARCC1-201ENST00000254480 ZNF415Q09FC8 603 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 CD177Q8N6Q3 437 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 J3QRE1 110 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 RALGAPA2Q2PPJ7 1873 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 TRBV7-9A0A0J9YWB2 115 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 LINC00271P0C7V0 271 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 EXOC3-AS1Q8N2X6 119 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 PSG8Q9UQ74 426 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 IL18BPO95998 194 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 PAX8Q06710 450 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 TMEM42Q69YG0 159 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 WNT2P09544 360 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 ZNF329Q86UD4 541 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 OCC1Q8TAD7 63 aa15.44■□□□□ 0.06
SMARCC1-201ENST00000254480 TRGV4A0A0C4DH28 118 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 LOC285556D6RIA3 1793 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 LINC00614P0C842 121 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 ZNF600Q6ZNG1 722 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 DOCK8Q8NF50 2099 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 PI4KAP42356 2102 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 ANK1P16157 1881 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 TTC9CQ8N5M4 171 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 TTC32Q5I0X7 151 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 CFAP161Q6P656 301 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 MAPK1IP1LQ8NDC0 245 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 NUDT10Q8NFP7 164 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 COPS9Q8WXC6 57 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 CARHSP1Q9Y2V2 147 aaKnown RBP15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 SAP30O75446 220 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 PRCDQ00LT1 54 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 C15orf32Q32M92 178 aa15.43■□□□□ 0.06
SMARCC1-201ENST00000254480 WNK3Q9BYP7 1800 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 PMS2P5A8MQ11 134 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 ATP5LO75964 103 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 MRPS16Q9Y3D3 137 aaKnown RBP15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 KIAA2026Q5HYC2 2103 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 COL4A6Q14031 1691 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 CACNA1BQ00975 2339 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 CNTFRP26992 372 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 HGFACQ04756 655 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 ABCA1O95477 2261 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 DIDO1Q9BTC0 2240 aaKnown RBP15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 WDR90Q96KV7 1748 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 SCRT1Q9BWW7 348 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 ST20Q9HBF5 79 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 DOCK7Q96N67 2140 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 PAX1P15863 534 aa15.42■□□□□ 0.06
SMARCC1-201ENST00000254480 TRAV41A0A0B4J266 112 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 FAM89BQ8N5H3 189 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 DMRT1Q9Y5R6 373 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 PVRIGQ6DKI7 326 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 HEATR1Q9H583 2144 aaKnown RBP15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 CLPSP04118 112 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 PGPEP1Q9NXJ5 209 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 SIGLEC15Q6ZMC9 328 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 VCX2Q9H322 139 aa15.41■□□□□ 0.06
SMARCC1-201ENST00000254480 IGHV3-53P01767 116 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 NPC2P61916 151 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 PLSCR4Q9NRQ2 329 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 H3BRM9 83 aa15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 RPL35AP18077 110 aaKnown RBP15.4■□□□□ 0.06
SMARCC1-201ENST00000254480 COQ2Q96H96 371 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms