RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SPACA3Q8IXA5 215 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 DAZAP1Q96EP5 407 aaKnown RBP13.72□□□□□ -0.21
SGPP1-201ENST00000247225 SARAFQ96BY9 339 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 MRPL36Q9P0J6 103 aaKnown RBP13.72□□□□□ -0.21
SGPP1-201ENST00000247225 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
SGPP1-201ENST00000247225 UPK2O00526 184 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 CCL25O15444 150 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 KLHDC1Q8N7A1 406 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 OR4C5Q8NGB2 326 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 RNF7Q9UBF6 113 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 TLN1Q9Y490 2541 aaKnown RBP13.71□□□□□ -0.21
SGPP1-201ENST00000247225 CD59P13987 128 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 C22orf34Q6ZV56 151 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 OSTCQ9NRP0 149 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 BET1LQ9NYM9 111 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 ZFP30Q9Y2G7 519 aa13.71□□□□□ -0.21
SGPP1-201ENST00000247225 TMSB15BA0A087X1C1 80 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 APOA2P02652 100 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 MT-ND6P03923 174 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 IGLL1P15814 213 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 Q8N976 141 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 RNASE8Q8TDE3 154 aaKnown RBP13.7□□□□□ -0.22
SGPP1-201ENST00000247225 TPSG1Q9NRR2 321 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 NDUFB8O95169 186 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 TSPOP30536 169 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 CA7P43166 264 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 PPOXP50336 477 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 FXYD7P58549 80 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 TBR1Q16650 682 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 NEUROG1Q92886 237 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 FOXA2Q9Y261 457 aaPredicted RBP13.7□□□□□ -0.22
SGPP1-201ENST00000247225 SVEP1Q4LDE5 3571 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 IZUMO1RA6ND01 250 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 PEX7O00628 323 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 IGLV2-8P01709 118 aa13.7□□□□□ -0.22
SGPP1-201ENST00000247225 RNASE2P10153 161 aaKnown RBP13.69□□□□□ -0.22
SGPP1-201ENST00000247225 PRCDQ00LT1 54 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 KIR2DS2P43631 304 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 MZT1Q08AG7 82 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 DEFB123Q8N688 67 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 FNDC4Q9H6D8 234 aaPredicted RBP13.69□□□□□ -0.22
SGPP1-201ENST00000247225 ZNF71Q9NQZ8 489 aaPredicted RBP13.69□□□□□ -0.22
SGPP1-201ENST00000247225 OTOGLQ3ZCN5 2332 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 hADV38S2A0JD32 116 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 FAM87AP0C7U9 286 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 CD69Q07108 199 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 DDB2Q92466 427 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 C11orf52Q96A22 123 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 SLC25A2Q9BXI2 301 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 RELNP78509 3460 aa13.69□□□□□ -0.22
SGPP1-201ENST00000247225 FAM181BA6NEQ2 426 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 J3QW42 95 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 CHEK1O14757 476 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 TMEM177Q53S58 311 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 MPV17L2Q567V2 206 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 RUSC1-AS1Q66K80 236 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 Q71RC1 249 aaPredicted RBP13.68□□□□□ -0.22
SGPP1-201ENST00000247225 CDX4O14627 284 aaPredicted RBP13.68□□□□□ -0.22
SGPP1-201ENST00000247225 NUDT3O95989 172 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 SFTPCP11686 197 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 BTF3P20290 206 aaKnown RBP13.68□□□□□ -0.22
SGPP1-201ENST00000247225 TMPRSS3P57727 454 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 RITA1Q96K30 269 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 TNFRSF19Q9NS68 423 aa13.68□□□□□ -0.22
SGPP1-201ENST00000247225 PRR33A8MZF0 331 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 TDGF1P13385 188 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 LYZP61626 148 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 DEFB124Q8NES8 71 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 OR1L8Q8NGR8 309 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 NAA38Q9BRA0 125 aaKnown RBP13.67□□□□□ -0.22
SGPP1-201ENST00000247225 TRGV8A0A0C4DH27 118 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 LOC389332A0A1B0GUA5 103 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 OR4C46A6NHA9 309 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 F2RL2O00254 374 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 PRNTQ86SH4 94 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 WT1-ASQ06250 92 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 OR10J3Q5JRS4 329 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 SPATA12Q7Z6I5 190 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 SLC25A10Q9UBX3 287 aaPredicted RBP13.67□□□□□ -0.22
SGPP1-201ENST00000247225 ARHGAP32A7KAX9 2087 aa13.67□□□□□ -0.22
SGPP1-201ENST00000247225 MAP1AP78559 2803 aaPredicted RBP13.66□□□□□ -0.22
SGPP1-201ENST00000247225 TRBV9A0A0B4J1U6 114 aa13.66□□□□□ -0.22
SGPP1-201ENST00000247225 ZNF474Q6S9Z5 364 aaPredicted RBP13.66□□□□□ -0.22
SGPP1-201ENST00000247225 OR8B3Q8NGG8 313 aa13.66□□□□□ -0.22
SGPP1-201ENST00000247225 ZNF596Q8TC21 504 aa13.66□□□□□ -0.22
SGPP1-201ENST00000247225 SERTM2A0A1B0GWG4 89 aa13.66□□□□□ -0.22
SGPP1-201ENST00000247225 UQCRFS1P47985 274 aa13.66□□□□□ -0.22
SGPP1-201ENST00000247225 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
SGPP1-201ENST00000247225 CIARTQ8N365 385 aaPredicted RBP13.66□□□□□ -0.22
SGPP1-201ENST00000247225 ZNF738Q8NE65 137 aa13.66□□□□□ -0.22
SGPP1-201ENST00000247225 ATRXP46100 2492 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 ZNF891A8MT65 544 aaPredicted RBP13.65□□□□□ -0.22
SGPP1-201ENST00000247225 P01737 135 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 RBP4P02753 201 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 PLGLAQ15195 96 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 PATE2Q6UY27 113 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 SLC25A15Q9Y619 301 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 VWC2LB2RUY7 222 aa13.65□□□□□ -0.22
SGPP1-201ENST00000247225 IGHV1-46P01743 117 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms