RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ZNF506Q5JVG8 444 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 DDB2Q92466 427 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 TPSG1Q9NRR2 321 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 FBLL1A6NHQ2 334 aaKnown RBP8.09□□□□□ -1.11
USP11-201ENST00000218348 TOMM40O96008 361 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 NPY1RP25929 384 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 SERF2P84101 59 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 WDR25Q64LD2 544 aaPredicted RBP8.09□□□□□ -1.11
USP11-201ENST00000218348 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 ACY3Q96HD9 319 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 SMIM7Q9BQ49 75 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 LINC00312Q9Y6C7 94 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 MT-CO2P00403 227 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 LOXP28300 417 aaPredicted RBP8.09□□□□□ -1.11
USP11-201ENST00000218348 THBS3P49746 956 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 GNB1P62873 340 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 GNB2P62879 340 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 RTL8BQ17RB0 113 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 TEX36Q5VZQ5 186 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 Q6ZN92 141 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 ZNF439Q8NDP4 499 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 VN1R17PQ8TDU5 208 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 PGPEP1Q9NXJ5 209 aa8.09□□□□□ -1.11
USP11-201ENST00000218348 NDUFS7O75251 213 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 VDAC2P45880 294 aaPredicted RBP8.08□□□□□ -1.12
USP11-201ENST00000218348 SLC25A48Q6ZT89 311 aaKnown RBP8.08□□□□□ -1.12
USP11-201ENST00000218348 MS4A10Q96PG2 267 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 MGST2Q99735 147 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 PSMG3Q9BT73 122 aaPredicted RBP8.08□□□□□ -1.12
USP11-201ENST00000218348 PLEKHA3Q9HB20 300 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 GAGE12BA1L429 117 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 C15orf61A6NNL5 157 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 CNTFRP26992 372 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 ATP5G3P48201 142 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 HSPE1P61604 102 aaKnown RBP8.08□□□□□ -1.12
USP11-201ENST00000218348 CR1LQ2VPA4 569 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 PRR31Q5SQ13 230 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 FAM90A2PQ658T7 463 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 TVP23CQ96ET8 276 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 DERL1Q9BUN8 251 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 PXMP4Q9Y6I8 212 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 PPIAL4CA0A0B4J2A2 164 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 HRASP01112 189 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 GATA3P23771 443 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 C3orf36Q3SXR2 165 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 HCP5Q6MZN7 132 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 NIT1Q86X76 327 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 ONECUT1Q9UBC0 465 aa8.08□□□□□ -1.12
USP11-201ENST00000218348 HELZ2Q9BYK8 2649 aaKnown RBP8.07□□□□□ -1.12
USP11-201ENST00000218348 TRAV30A0A087WSZ9 112 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 A4D1N5 150 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 FOXH1O75593 365 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 PSMB3P49720 205 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 COMMD5Q9GZQ3 224 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 VAX2Q9UIW0 290 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 ZFHX3Q15911 3703 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 USP9YO00507 2555 aaPredicted RBP8.07□□□□□ -1.12
USP11-201ENST00000218348 APOA2P02652 100 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 CDKN1AP38936 164 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 ARF6P62330 175 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 MEF2BQ02080 365 aaPredicted RBP8.07□□□□□ -1.12
USP11-201ENST00000218348 DPPA3Q6W0C5 159 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 OR2T6Q8NHC8 308 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 THYN1Q9P016 225 aa8.07□□□□□ -1.12
USP11-201ENST00000218348 CTXND1A0A1B0GTU2 59 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 TEX50A0A1B0GTY4 177 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 C17orf112F2Z3M2 114 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 ARL14EPLP0DKL9 152 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 HNRNPA3P51991 378 aaKnown RBP8.06□□□□□ -1.12
USP11-201ENST00000218348 AMMECR1LQ6DCA0 310 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 TCTEX1D1Q8N7M0 179 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 OR9G1Q8NH87 305 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 MBD3L1Q8WWY6 194 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 FLYWCH2Q96CP2 140 aaKnown RBP8.06□□□□□ -1.12
USP11-201ENST00000218348 SMPXQ9UHP9 88 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 WDR83OSQ9Y284 106 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 LRRK2Q5S007 2527 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 KBTBD11O94819 623 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 PDLIM4P50479 330 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 ACOT6Q3I5F7 207 aaPredicted RBP8.06□□□□□ -1.12
USP11-201ENST00000218348 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 C11orf94C9JXX5 98 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 C19orf84I3L1E1 186 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 IFNA1P01562 189 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 CRYGCP07315 174 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 OR10J4P0C629 311 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 ZNF672Q499Z4 452 aaPredicted RBP8.06□□□□□ -1.12
USP11-201ENST00000218348 ASPHD1Q5U4P2 390 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 PNKDQ8N490 385 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 RAB9BQ9NP90 201 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 HILPDAQ9Y5L2 63 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
USP11-201ENST00000218348 H0YJW9 148 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 SSBP2P81877 361 aaPredicted RBP8.05□□□□□ -1.12
USP11-201ENST00000218348 OR4P4Q8NGL7 312 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 PARLQ9H300 379 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 TMEM14BQ9NUH8 114 aa8.05□□□□□ -1.12
USP11-201ENST00000218348 UPK2O00526 184 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms