RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 FAM90A15PP0C7V4 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A13PP0C7W8 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A14PP0C7W9 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A24PP0C7X0 464 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 ZXDCQ2QGD7 858 aaPredicted RBP12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 PRR19A6NJB7 356 aa12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 CEACAM8P31997 349 aaPredicted RBP12.31□□□□□ -0.44
SPTLC2-201ENST00000216484 IGKV1D-16P01601 117 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 ASPHD2Q6ICH7 369 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 SORL1Q92673 2214 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 CACNG8Q8WXS5 425 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 A0A087WWC5 75 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 APOBEC3AP31941 199 aaPredicted RBP12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 C19orf48Q6RUI8 117 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 PPP1R3EQ9H7J1 279 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 DPM3Q9P2X0 92 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 A0A087X0K7 114 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 NOVP48745 357 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 Q96M66 194 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 LCNL1Q6ZST4 164 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 C7orf69Q9H7B7 122 aa12.3□□□□□ -0.44
SPTLC2-201ENST00000216484 TM4SF5O14894 197 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 TRACP01848 142 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 BCL6BQ8N143 479 aaPredicted RBP12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 CXorf51AA0A1B0GTR3 108 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 UMODP07911 640 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 TEX43Q6ZNM6 134 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 DMRTC2Q8IXT2 367 aaPredicted RBP12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 TBX6O95947 436 aaPredicted RBP12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 LHFPL6Q9Y693 200 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 POC1AQ8NBT0 407 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 ADAMTSL1Q8N6G6 1762 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 PATE3B3GLJ2 98 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 NBASA2RRP1 2371 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 IRF3Q14653 427 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 ZNF474Q6S9Z5 364 aaPredicted RBP12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 NDUFAF3Q9BU61 184 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 C9JAW5 83 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 ZIC4Q8N9L1 334 aa12.29□□□□□ -0.44
SPTLC2-201ENST00000216484 LCTP09848 1927 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 TRAV25A0A0B4J276 109 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 NPIPB13A6NJU9 1138 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 NPIPB5A8MRT5 1133 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 CISD3P0C7P0 127 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 PPBPP02775 128 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 SIGLEC15Q6ZMC9 328 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 CENPVL1A0A0U1RR11 272 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 IMMP1LQ96LU5 166 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 RCHY1Q96PM5 261 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 TRAV12-1A0A0B4J245 112 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 OR13A1Q8NGR1 328 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 DSCR8Q96T75 97 aa12.28□□□□□ -0.44
SPTLC2-201ENST00000216484 ZNF708P17019 499 aa12.27□□□□□ -0.44
SPTLC2-201ENST00000216484 ACP7Q6ZNF0 438 aa12.27□□□□□ -0.44
SPTLC2-201ENST00000216484 DUSP14O95147 198 aaKnown RBP12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 PSG3Q16557 428 aa12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 EFEMP2O95967 443 aa12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 R3HDMLQ9H3Y0 253 aa12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 SPRED2Q7Z698 418 aa12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 PRB1P04280 392 aa12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 LHBP01229 141 aa12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 OSR1Q8TAX0 266 aaPredicted RBP12.27□□□□□ -0.45
SPTLC2-201ENST00000216484 PEX11BO96011 259 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 C1QAP02745 245 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 RPL23P62829 140 aaKnown RBP12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 OR5P3Q8WZ94 311 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 BSPH1Q075Z2 132 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 SRP19P09132 144 aaKnown RBP12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 IL9P15248 144 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 SLC25A47Q6Q0C1 308 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 TRGV1A0A0A0MS02 117 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 EGR2P11161 476 aaPredicted RBP12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
SPTLC2-201ENST00000216484 FXYD7P58549 80 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 Q5BKY6 102 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 TMEM170AQ8WVE7 144 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 IGHG3P01860 377 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 RIPPLY2Q5TAB7 128 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 TNRC6BQ9UPQ9 1833 aaKnown RBP12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 CD24P25063 80 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 PRSS23O95084 383 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 IGHV3-53P01767 116 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 SRXN1Q9BYN0 137 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 CACNA1HO95180 2353 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 STPG1Q5TH74 334 aa12.25□□□□□ -0.45
SPTLC2-201ENST00000216484 SOCS3O14543 225 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 SS18Q15532 418 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 TICRRQ7Z2Z1 1910 aa12.24□□□□□ -0.45
SPTLC2-201ENST00000216484 TRBV5-5A0A0J9YX44 114 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms