RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MISP3Q96FF7 219 aa7.73□□□□□ -1.17
PHGDH-215ENST00000641371 AJUBAQ96IF1 538 aa7.73□□□□□ -1.17
PHGDH-215ENST00000641371 ATP6V0BQ99437 205 aa7.73□□□□□ -1.17
PHGDH-215ENST00000641371 KLK9Q9UKQ9 250 aa7.73□□□□□ -1.17
PHGDH-215ENST00000641371 USP9YO00507 2555 aaPredicted RBP7.73□□□□□ -1.17
PHGDH-215ENST00000641371 ABCA2Q9BZC7 2435 aa7.73□□□□□ -1.17
PHGDH-215ENST00000641371 DCHS2Q6V1P9 2916 aa7.73□□□□□ -1.17
PHGDH-215ENST00000641371 PRRC2AP48634 2157 aaKnown RBP7.72□□□□□ -1.17
PHGDH-215ENST00000641371 LOC102723971A0A1B0GUV8 181 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 APOC3P02656 99 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 OR5G3P0C626 314 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 SFTA3P0C7M3 94 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 STAG3L2P0CL84 134 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 STAG3L3P0CL85 134 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 AREGP15514 252 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 OR10J1P30954 320 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 CRIP2P52943 208 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-215ENST00000641371 SSBP2P81877 361 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-215ENST00000641371 ZNF726P1Q15940 193 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 MIC13Q5XKP0 118 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 C9orf139Q6ZV77 190 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 STXBP6Q8NFX7 210 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 OR5R1Q8NH85 324 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 SGMS2Q8NHU3 365 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 NRGNQ92686 78 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 ACY3Q96HD9 319 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 TXN2Q99757 166 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 SLC25A33Q9BSK2 321 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 WNT10AQ9GZT5 417 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 SLC25A22Q9H936 323 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 TMEM167BQ9NRX6 74 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 TECRQ9NZ01 308 aaKnown RBP7.72□□□□□ -1.17
PHGDH-215ENST00000641371 GNG13Q9P2W3 67 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 NAV3Q8IVL0 2385 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 PLXNB1O43157 2135 aa7.72□□□□□ -1.17
PHGDH-215ENST00000641371 IGHV7-81A0A0B4J1V7 117 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 TMEM250H0YL14 139 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 FCN1O00602 326 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 CLN5O75503 358 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 YIF1AO95070 293 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 FCGR2BP31994 310 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-215ENST00000641371 RND2P52198 227 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 PLP1P60201 277 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 FAM74A3Q4VXF1 159 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 AKIRIN2Q53H80 203 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 SOHLH1Q5JUK2 328 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 CYB5R2Q6BCY4 276 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 C5orf56Q8N8D9 126 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 FAM110DQ8TAY7 271 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-215ENST00000641371 NPIPB3Q92617 1050 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 SCRT1Q9BWW7 348 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 FNDC4Q9H6D8 234 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-215ENST00000641371 VSIRQ9H7M9 311 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 TNFRSF19Q9NS68 423 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 ZNF580Q9UK33 172 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 FUT9Q9Y231 359 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 RFNGQ9Y644 331 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 PTPN13Q12923 2485 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 DOPEY2Q9Y3R5 2298 aa7.71□□□□□ -1.18
PHGDH-215ENST00000641371 IGLV11-55A0A075B6I3 123 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 RNF223E7ERA6 249 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 F6UZH7 168 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 H3BUA1 57 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 I3L2K1 104 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 PDE6DO43924 150 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 COX7A2P2O60397 106 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 BRI3O95415 125 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 TGFAP01135 160 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 REG1AP05451 166 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 LINC00869P0C866 280 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 IGHV4-31P0DP07 118 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 COL8A1P27658 744 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 MFAP4P55083 255 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 DEFA5Q01523 94 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 MEF2BQ02080 365 aaPredicted RBP7.7□□□□□ -1.18
PHGDH-215ENST00000641371 PNRC1Q12796 327 aaPredicted RBP7.7□□□□□ -1.18
PHGDH-215ENST00000641371 VN1R17PQ8TDU5 208 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 C17orf50Q8WW18 174 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 SSX3Q99909 188 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 FOXC2Q99958 501 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 NKX6-2Q9C056 277 aaPredicted RBP7.7□□□□□ -1.18
PHGDH-215ENST00000641371 DNAJC4Q9NNZ3 241 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 PRELID1Q9Y255 219 aa7.7□□□□□ -1.18
PHGDH-215ENST00000641371 IGKV1OR2-108A0A075B7D4 117 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 A6NDX4 124 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 SRP19P09132 144 aaKnown RBP7.69□□□□□ -1.18
PHGDH-215ENST00000641371 C8orf88P0DMB2 117 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 IGHV4-38-2P0DP08 117 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 CD24P25063 80 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 KRTAP10-9P60411 292 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 ICAM4Q14773 271 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 HAGHQ16775 308 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 FAM209BQ5JX69 171 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 FAM78BQ5VT40 261 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 RUSC1-AS1Q66K80 236 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 SPNS3Q6ZMD2 512 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 OR2T6Q8NHC8 308 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 Q96MF0 132 aa7.69□□□□□ -1.18
PHGDH-215ENST00000641371 TCEAL7Q9BRU2 100 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms