RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FAM201AQ5SY85 155 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 PGLYRP4Q96LB8 373 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 FAM173AQ9BQD7 235 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 RTL8AQ9BWD3 113 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 POLDIP2Q9Y2S7 368 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 COL5A1P20908 1838 aaPredicted RBP11.28□□□□□ -0.6
SCARB2-227ENST00000640957 ISLRO14498 428 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 MPV17P39210 176 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 MEOX1P50221 254 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 UBALD2Q8IYN6 164 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 SLC25A40Q8TBP6 338 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 TRIB1Q96RU8 372 aa11.28□□□□□ -0.6
SCARB2-227ENST00000640957 IGHV3-21A0A0B4J1V1 117 aa11.27□□□□□ -0.6
SCARB2-227ENST00000640957 ERVK-16P61578 105 aa11.27□□□□□ -0.6
SCARB2-227ENST00000640957 RIPPLY2Q5TAB7 128 aa11.27□□□□□ -0.6
SCARB2-227ENST00000640957 SLC25A34Q6PIV7 304 aa11.27□□□□□ -0.6
SCARB2-227ENST00000640957 BHLHA15Q7RTS1 189 aaPredicted RBP11.27□□□□□ -0.6
SCARB2-227ENST00000640957 RAB1CQ92928 201 aa11.27□□□□□ -0.6
SCARB2-227ENST00000640957 GUCD1Q96NT3 240 aa11.27□□□□□ -0.6
SCARB2-227ENST00000640957 MBNL3Q9NUK0 354 aaKnown RBP11.27□□□□□ -0.6
SCARB2-227ENST00000640957 OTOGLQ3ZCN5 2332 aa11.27□□□□□ -0.6
SCARB2-227ENST00000640957 WNK2Q9Y3S1 2297 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 TRBV6-6A0A0A6YYG2 114 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 FAM231BA6NCW3 169 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 MT-CO2P00403 227 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-227ENST00000640957 SRSF6Q13247 344 aaKnown RBP11.27□□□□□ -0.61
SCARB2-227ENST00000640957 PRSS57Q6UWY2 283 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 OR10W1Q8NGF6 305 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 MT-ND6P03923 174 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
SCARB2-227ENST00000640957 ZNRF1Q8ND25 227 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 TAAR6Q96RI8 345 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.61
SCARB2-227ENST00000640957 HES4Q9HCC6 221 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 DUSP13Q9UII6 198 aa11.27□□□□□ -0.61
SCARB2-227ENST00000640957 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 H3BUT2 72 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 LRRC10Q5BKY1 277 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 WFDC3Q8IUB2 231 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 GSX1Q9H4S2 264 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-227ENST00000640957 ENY2Q9NPA8 101 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 MPC1Q9Y5U8 109 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 LEPROTL1O95214 131 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 HOXC12P31275 282 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 DUTP33316 252 aaKnown RBP11.26□□□□□ -0.61
SCARB2-227ENST00000640957 TMEM108Q6UXF1 575 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 RND1Q92730 232 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 C7orf71A4D174 169 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 C9orf172C9J069 976 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 NTN3O00634 580 aaPredicted RBP11.26□□□□□ -0.61
SCARB2-227ENST00000640957 MORN2Q502X0 79 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 MOB1BQ7L9L4 216 aa11.26□□□□□ -0.61
SCARB2-227ENST00000640957 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 IZUMO1RA6ND01 250 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
SCARB2-227ENST00000640957 PIGBOS1A0A0B4J2F0 54 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 OOEPA6NGQ2 149 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 C9JCJ5 164 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 SPINT2O43291 252 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 RAB31Q13636 194 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 OR1B1Q8NGR6 318 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 S1PR3Q99500 378 aa11.25□□□□□ -0.61
SCARB2-227ENST00000640957 NPIPB11E5RHQ5 1161 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 K7ERU9 68 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 PPBPP02775 128 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
SCARB2-227ENST00000640957 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 TRBV9A0A0B4J1U6 114 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 IGHV1-24A0A0C4DH33 117 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 DEFB108BQ8NET1 73 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 F11RQ9Y624 299 aaKnown RBP11.24□□□□□ -0.61
SCARB2-227ENST00000640957 SYS1-DBNDD2H3BUS1 97 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
SCARB2-227ENST00000640957 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
SCARB2-227ENST00000640957 A0A1W2PRE2 83 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 SMIM27A0A1W2PRY6 76 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 WISP2O76076 250 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 AREGP15514 252 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 TBR1Q16650 682 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
SCARB2-227ENST00000640957 SAP30LQ9HAJ7 183 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 MUC6Q6W4X9 2439 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 LOC389332A0A1B0GUA5 103 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 KLRC4-KLRK1H3BQV0 150 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 ARR3P36575 388 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 MTURNQ8N3F0 131 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 AP1S3Q96PC3 154 aa11.23□□□□□ -0.61
SCARB2-227ENST00000640957 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 PRSS46E5RG02 174 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 EIF4EBP1Q13541 118 aaPredicted RBP11.22□□□□□ -0.61
SCARB2-227ENST00000640957 GTSF1LQ9H1H1 148 aa11.22□□□□□ -0.61
SCARB2-227ENST00000640957 NCR2O95944 276 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms