RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 SCGB2A1O75556 95 aa18.75■□□□□ 0.59
VEGFA-230ENST00000640482 OPRK1P41145 380 aa18.75■□□□□ 0.59
VEGFA-230ENST00000640482 APOC4P55056 127 aa18.75■□□□□ 0.59
VEGFA-230ENST00000640482 ODF3L2Q3SX64 289 aa18.75■□□□□ 0.59
VEGFA-230ENST00000640482 TOMM20LQ6UXN7 152 aa18.75■□□□□ 0.59
VEGFA-230ENST00000640482 CACNG5Q9UF02 275 aa18.75■□□□□ 0.59
VEGFA-230ENST00000640482 TMEM56-RWDD3S4R434 201 aa18.75■□□□□ 0.59
VEGFA-230ENST00000640482 TMEM50AO95807 157 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 CD5P06127 495 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 HTR2BP41595 481 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 BSXQ3C1V8 233 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 IL22RA2Q969J5 263 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 GPR146Q96CH1 333 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 GALNT14Q96FL9 552 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 CACFD1Q9UGQ2 172 aa18.74■□□□□ 0.59
VEGFA-230ENST00000640482 PUS1Q9Y606 427 aaKnown RBP eCLIP18.74■□□□□ 0.59
VEGFA-230ENST00000640482 CMC4P56277 68 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-230ENST00000640482 HEYLQ9NQ87 328 aaPredicted RBP18.73■□□□□ 0.59
VEGFA-230ENST00000640482 RPS10-NUDT3A0A1W2PQS6 291 aa18.72■□□□□ 0.59
VEGFA-230ENST00000640482 CCDC160A6NGH7 325 aa18.72■□□□□ 0.59
VEGFA-230ENST00000640482 CLN5O75503 358 aa18.72■□□□□ 0.59
VEGFA-230ENST00000640482 FAUP35544 74 aaKnown RBP18.72■□□□□ 0.59
VEGFA-230ENST00000640482 OR4X1Q8NH49 305 aa18.72■□□□□ 0.59
VEGFA-230ENST00000640482 OVOL2Q9BRP0 275 aa18.72■□□□□ 0.59
VEGFA-230ENST00000640482 FNDC4Q9H6D8 234 aaPredicted RBP18.72■□□□□ 0.59
VEGFA-230ENST00000640482 CSMD3Q7Z407 3707 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 IGHV3OR16-13A0A075B7E8 117 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 IGHV3-74A0A0B4J1X5 117 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 CEBPZOSA8MTT3 80 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 PAFAH1B2P68402 229 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 TMEM187Q14656 261 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 TMEM230Q96A57 120 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 ZFAND3Q9H8U3 227 aa18.71■□□□□ 0.59
VEGFA-230ENST00000640482 STARD9Q9P2P6 4700 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 IGKV3-7A0A075B6H7 116 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 KIR2DL5BA0A0G2JN68 375 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 KIR2DL5BA0A0G2JPC4 375 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 UBE2CO00762 179 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 SULT1A3P0DMM9 295 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 SULT1A4P0DMN0 295 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 TFPI2P48307 235 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 AP3S2P59780 193 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 PYDC2Q56P42 97 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 FAM90A2PQ658T7 463 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 Q6ZWC4 215 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 TCF24Q7RTU0 167 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 KIR2DL5AQ8N109 375 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 KIR2DL5BQ8NHK3 375 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 TMEM231Q9H6L2 316 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 VSIRQ9H7M9 311 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 TP53TG1Q9Y2A0 90 aa18.7■□□□□ 0.58
VEGFA-230ENST00000640482 ANXA3P12429 323 aa18.69■□□□□ 0.58
VEGFA-230ENST00000640482 AKR1C4P17516 323 aa18.69■□□□□ 0.58
VEGFA-230ENST00000640482 C2orf83Q53S99 150 aa18.69■□□□□ 0.58
VEGFA-230ENST00000640482 STPG3Q8N7X2 389 aa18.69■□□□□ 0.58
VEGFA-230ENST00000640482 SLC24A4Q8NFF2 622 aa18.69■□□□□ 0.58
VEGFA-230ENST00000640482 ST8SIA2Q92186 375 aa18.69■□□□□ 0.58
VEGFA-230ENST00000640482 MRPL36Q9P0J6 103 aaKnown RBP18.69■□□□□ 0.58
VEGFA-230ENST00000640482 DYNC2H1Q8NCM8 4307 aaKnown RBP18.69■□□□□ 0.58
VEGFA-230ENST00000640482 TRAV30A0A087WSZ9 112 aa18.68■□□□□ 0.58
VEGFA-230ENST00000640482 LCE6AA0A183 80 aa18.68■□□□□ 0.58
VEGFA-230ENST00000640482 A0A1B0GU03 582 aa18.68■□□□□ 0.58
VEGFA-230ENST00000640482 S100A5P33763 92 aa18.68■□□□□ 0.58
VEGFA-230ENST00000640482 MLANAQ16655 118 aa18.68■□□□□ 0.58
VEGFA-230ENST00000640482 RNASEH2CQ8TDP1 164 aaKnown RBP18.68■□□□□ 0.58
VEGFA-230ENST00000640482 A0A0B4J2A0 478 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 RPL35AP18077 110 aaKnown RBP18.67■□□□□ 0.58
VEGFA-230ENST00000640482 NPPCP23582 126 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 SRPXP78539 464 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 KLF9Q13886 244 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-230ENST00000640482 NOXA1Q86UR1 476 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 APRG1Q8IVJ8 170 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 TOMM5Q8N4H5 51 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 GBGT1Q8N5D6 347 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 METTL26Q96S19 204 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 PRR13Q9NZ81 148 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 SHPKQ9UHJ6 478 aa18.67■□□□□ 0.58
VEGFA-230ENST00000640482 PIGBOS1A0A0B4J2F0 54 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 A0A1W2PS18 150 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 SPRY2O43597 315 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 NXPH3O95157 252 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 APOHP02749 345 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-230ENST00000640482 SLC25A4P12235 298 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 CCR6P51684 374 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 SUPT4H1P63272 117 aaKnown RBP18.66■□□□□ 0.58
VEGFA-230ENST00000640482 NMSQ5H8A3 153 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 WFDC3Q8IUB2 231 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 LGI3Q8N145 548 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 TRIM63Q969Q1 353 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 LYSTQ99698 3801 aa18.66■□□□□ 0.58
VEGFA-230ENST00000640482 IGHV3-66A0A0C4DH42 116 aa18.65■□□□□ 0.58
VEGFA-230ENST00000640482 DNASE2O00115 360 aaPredicted RBP18.65■□□□□ 0.58
VEGFA-230ENST00000640482 NPY1RP25929 384 aa18.65■□□□□ 0.58
VEGFA-230ENST00000640482 RPL11P62913 178 aaKnown RBP18.65■□□□□ 0.58
VEGFA-230ENST00000640482 SMCO1Q147U7 214 aa18.65■□□□□ 0.58
VEGFA-230ENST00000640482 DEFB135Q30KP9 77 aa18.65■□□□□ 0.58
VEGFA-230ENST00000640482 ETFRF1Q6IPR1 90 aa18.65■□□□□ 0.58
VEGFA-230ENST00000640482 OR1S2Q8NGQ3 325 aa18.65■□□□□ 0.58
VEGFA-230ENST00000640482 NARS2Q96I59 477 aaKnown RBP18.65■□□□□ 0.58
VEGFA-230ENST00000640482 V9GYH0 126 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms