RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TMEM14EPQ6UXP3 125 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 SCGB1D4Q6XE38 83 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 OR4B1Q8NGF8 309 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 CHODLQ9H9P2 273 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 PCDH15Q96QU1 1955 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 BTF3P20290 206 aaKnown RBP11.93□□□□□ -0.5
SCARB2-216ENST00000639300 GNG5P63218 68 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 TMEM97Q5BJF2 176 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 TECTAO75443 2155 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 SONP18583 2426 aaKnown RBP11.93□□□□□ -0.5
SCARB2-216ENST00000639300 SCGB1C2P0DMR2 95 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 COL5A1-AS1Q5SY13 56 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 RNF166Q96A37 237 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-216ENST00000639300 CRIM1Q9NZV1 1036 aa11.93□□□□□ -0.5
SCARB2-216ENST00000639300 ZNF585BQ52M93 769 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 KIR3DL3Q8N743 410 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 CYYR1Q96J86 154 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 DERL1Q9BUN8 251 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 TMEM133Q9H2Q1 129 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 FOXI3A8MTJ6 420 aaPredicted RBP11.92□□□□□ -0.5
SCARB2-216ENST00000639300 TBR1Q16650 682 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 AUP1Q9Y679 476 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 PRCDQ00LT1 54 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 PPP1R27Q86WC6 154 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 C1QL4Q86Z23 238 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 MYOZ3Q8TDC0 251 aa11.92□□□□□ -0.5
SCARB2-216ENST00000639300 RNASEH2CQ8TDP1 164 aaKnown RBP11.92□□□□□ -0.5
SCARB2-216ENST00000639300 IGKV1D-17A0A075B6S4 117 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 TRAV5A0A0B4J249 113 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 LYL1P12980 280 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 SPACA3Q8IXA5 215 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
SCARB2-216ENST00000639300 LOC102724200A0A096LPH7 203 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-216ENST00000639300 CA1P00915 261 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-216ENST00000639300 TIMP3P35625 211 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 ZNF474Q6S9Z5 364 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-216ENST00000639300 RBPMS2Q6ZRY4 209 aaKnown RBP11.91□□□□□ -0.5
SCARB2-216ENST00000639300 KCNS1Q96KK3 526 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 C21orf62Q9NYP8 219 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 RAXQ9Y2V3 346 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 TRBV6-6A0A0A6YYG2 114 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 A0A1B0GV90 55 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 J3QR89 54 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 HBBP68871 147 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 FBXL7Q9UJT9 491 aa11.91□□□□□ -0.5
SCARB2-216ENST00000639300 TBL2Q9Y4P3 447 aaKnown RBP11.91□□□□□ -0.5
SCARB2-216ENST00000639300 PMCHL1Q16048 86 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 SERF1AO75920 110 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 NPPCP23582 126 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 GPR183P32249 361 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
SCARB2-216ENST00000639300 RPRMLQ8N4K4 120 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 UQCR10Q9UDW1 63 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 CBY1Q9Y3M2 126 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 TRBV9A0A0B4J1U6 114 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 DPRXA6NFQ7 191 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 FOLR2P14207 255 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 ANOS1P23352 680 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 PIEZO1Q92508 2521 aa11.9□□□□□ -0.5
SCARB2-216ENST00000639300 TRAV1-1A0A0B4J248 108 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 TCF21O43680 179 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 Q6ZS49 121 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 OR4C46A6NHA9 309 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 HIGD1CA8MV81 97 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 CX3CL1P78423 397 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 GPR82Q96P67 336 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
SCARB2-216ENST00000639300 KLK15Q9H2R5 256 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 IGHG3P01860 377 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 UQCRFS1P47985 274 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 MLANAQ16655 118 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 TEX38Q6PEX7 206 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 AP5S1Q9NUS5 200 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 IGKV3-15P01624 115 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 STAG3L2P0CL84 134 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 STAG3L3P0CL85 134 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 TCF24Q7RTU0 167 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 C14orf144Q96I85 54 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 Q9H3A6 140 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 CDC42EP3Q9UKI2 254 aa11.89□□□□□ -0.51
SCARB2-216ENST00000639300 C5orf52A6NGY3 159 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 SH2D7A6NKC9 451 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-216ENST00000639300 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 PCNX3Q9H6A9 2034 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 FBLL1A6NHQ2 334 aaKnown RBP11.88□□□□□ -0.51
SCARB2-216ENST00000639300 TIMM23O14925 209 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 CTAG1AP78358 180 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 SRSF9Q13242 221 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCARB2-216ENST00000639300 TMEM200BQ69YZ2 307 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 SPSB3Q6PJ21 355 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 TMEM170AQ8WVE7 144 aa11.88□□□□□ -0.51
SCARB2-216ENST00000639300 ZFP30Q9Y2G7 519 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms