RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 CORTO00230 105 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 ATG12O94817 140 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 TBPP20226 339 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 SUB1P53999 127 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMN2-216ENST00000638794 LGALS9CQ6DKI2 356 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 MFFQ9GZY8 342 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 NAA50Q9GZZ1 169 aaKnown RBP12.32□□□□□ -0.44
SMN2-216ENST00000638794 TMEM231Q9H6L2 316 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 COPZ2Q9P299 210 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 RABAC1Q9UI14 185 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 DEFB4AO15263 64 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 CLN5O75503 358 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 UCP1P25874 307 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 OPRK1P41145 380 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 TMEM187Q14656 261 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 RBMS2Q15434 407 aaKnown RBP12.31□□□□□ -0.44
SMN2-216ENST00000638794 MLANAQ16655 118 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 CCDC71LQ8N9Z2 235 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 AP3S1Q92572 193 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 ABHD1Q96SE0 405 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
SMN2-216ENST00000638794 A0A1W2PS18 150 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 NPPCP23582 126 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 CTF1Q16619 201 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 BSXQ3C1V8 233 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 Q6ZRM9 215 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 STHQ8IWL8 128 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 STXBP6Q8NFX7 210 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 TERB2Q8NHR7 220 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
SMN2-216ENST00000638794 ZFAND1Q8TCF1 268 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 RRNAD1Q96FB5 475 aaKnown RBP12.3□□□□□ -0.44
SMN2-216ENST00000638794 METTL26Q96S19 204 aa12.3□□□□□ -0.44
SMN2-216ENST00000638794 GABARAPO95166 117 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 CD74P04233 296 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 IFNA4P05014 189 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 ZNF182P17025 639 aaPredicted RBP12.29□□□□□ -0.44
SMN2-216ENST00000638794 CRYBB3P26998 211 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 RPL5P46777 297 aaKnown RBP12.29□□□□□ -0.44
SMN2-216ENST00000638794 SCGB2B2Q4G0G5 96 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 TMEM229BQ8NBD8 167 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 MARCH1Q8TCQ1 289 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 HECTD4Q9Y4D8 3996 aa12.29□□□□□ -0.44
SMN2-216ENST00000638794 K7EQG2 157 aa12.28□□□□□ -0.44
SMN2-216ENST00000638794 RAB3DO95716 219 aa12.28□□□□□ -0.44
SMN2-216ENST00000638794 IGKV1-17P01599 117 aa12.28□□□□□ -0.44
SMN2-216ENST00000638794 GIG44P09565 113 aaPredicted RBP12.28□□□□□ -0.44
SMN2-216ENST00000638794 P2RY1P47900 373 aa12.28□□□□□ -0.44
SMN2-216ENST00000638794 TAS2R19P59542 299 aa12.28□□□□□ -0.44
SMN2-216ENST00000638794 TIGITQ495A1 244 aa12.28□□□□□ -0.44
SMN2-216ENST00000638794 TRPT1Q86TN4 253 aaKnown RBP12.28□□□□□ -0.44
SMN2-216ENST00000638794 TMEM230Q96A57 120 aa12.28□□□□□ -0.44
SMN2-216ENST00000638794 SCGB2A1O75556 95 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 B3GALNT1O75752 331 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 CDS2O95674 445 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 OR5AC1P0C628 307 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 SPCS3P61009 180 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 AARDQ4LEZ3 155 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 FAAP20Q6NZ36 180 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 STEAP1BQ6NZ63 245 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 Q8NAQ8 132 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 LHFPL5Q8TAF8 219 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 C2CD4CQ8TF44 421 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 DCANP1Q8TF63 244 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 C15orf40Q8WUR7 153 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 GRAMD2BQ96HH9 432 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 TMEM222Q9H0R3 208 aa12.27□□□□□ -0.45
SMN2-216ENST00000638794 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
SMN2-216ENST00000638794 SMIM18P0DKX4 95 aa12.26□□□□□ -0.45
SMN2-216ENST00000638794 HTR2BP41595 481 aa12.26□□□□□ -0.45
SMN2-216ENST00000638794 FAM219AQ8IW50 185 aa12.26□□□□□ -0.45
SMN2-216ENST00000638794 OR52E5Q8NH55 327 aa12.26□□□□□ -0.45
SMN2-216ENST00000638794 GLYATL2Q8WU03 294 aa12.26□□□□□ -0.45
SMN2-216ENST00000638794 NARS2Q96I59 477 aaKnown RBP12.26□□□□□ -0.45
SMN2-216ENST00000638794 MIXL1Q9H2W2 232 aa12.26□□□□□ -0.45
SMN2-216ENST00000638794 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.26□□□□□ -0.45
SMN2-216ENST00000638794 TRAV30A0A087WSZ9 112 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 RPS10-NUDT3A0A1W2PQS6 291 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 KNCNA6PVL3 124 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 GABARAPH6UMI1 98 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 C4BPBP20851 252 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 PRR20EP86478 221 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 PRR20CP86479 221 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 PRR20DP86480 221 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 PRR20BP86481 221 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 PRR20AP86496 221 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 GPR107Q5VW38 600 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 PRSS54Q6PEW0 395 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 RTBDNQ9BSG5 229 aaPredicted RBP12.25□□□□□ -0.45
SMN2-216ENST00000638794 NAA60Q9H7X0 242 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 HEYLQ9NQ87 328 aaPredicted RBP12.25□□□□□ -0.45
SMN2-216ENST00000638794 C14orf166Q9Y224 244 aaKnown RBP12.25□□□□□ -0.45
SMN2-216ENST00000638794 U3KQE9 123 aa12.25□□□□□ -0.45
SMN2-216ENST00000638794 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
SMN2-216ENST00000638794 IGLC1P0CG04 106 aa12.24□□□□□ -0.45
SMN2-216ENST00000638794 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
SMN2-216ENST00000638794 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms