RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 V9GYH0 126 aa13.17□□□□□ -0.3
PNKP-230ENST00000638016 LOC102724200A0A096LPH7 203 aaPredicted RBP13.16□□□□□ -0.3
PNKP-230ENST00000638016 A0A1B0GU03 582 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
PNKP-230ENST00000638016 TMEM187Q14656 261 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 ZNF79Q15937 498 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 BSXQ3C1V8 233 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 AARDQ4LEZ3 155 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 LILRB2Q8N423 598 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 TMEM116Q8NCL8 245 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 DUSP18Q8NEJ0 188 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 RBM38Q9H0Z9 239 aaKnown RBP13.16□□□□□ -0.3
PNKP-230ENST00000638016 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 ENY2Q9NPA8 101 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 RABL2AQ9UBK7 228 aaPredicted RBP13.16□□□□□ -0.3
PNKP-230ENST00000638016 RABL2BQ9UNT1 228 aa13.16□□□□□ -0.3
PNKP-230ENST00000638016 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
PNKP-230ENST00000638016 B3GALNT1O75752 331 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 TMEM50AO95807 157 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 AKR1C4P17516 323 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 OPRK1P41145 380 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 DHODHQ02127 395 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 KLF9Q13886 244 aaPredicted RBP13.15□□□□□ -0.3
PNKP-230ENST00000638016 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 TMEM170AQ8WVE7 144 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
PNKP-230ENST00000638016 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 NPBWR1P48145 328 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 SPCS3P61009 180 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 PYDC2Q56P42 97 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 FAM90A2PQ658T7 463 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 APRG1Q8IVJ8 170 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 FAM219AQ8IW50 185 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.14□□□□□ -0.31
PNKP-230ENST00000638016 SCP2D1Q9UJQ7 156 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 TMEM56-RWDD3S4R434 201 aa13.14□□□□□ -0.31
PNKP-230ENST00000638016 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
PNKP-230ENST00000638016 SUB1P53999 127 aaKnown RBP eCLIP13.13□□□□□ -0.31
PNKP-230ENST00000638016 ZNF600Q6ZNG1 722 aa13.13□□□□□ -0.31
PNKP-230ENST00000638016 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
PNKP-230ENST00000638016 OR52E5Q8NH55 327 aa13.13□□□□□ -0.31
PNKP-230ENST00000638016 GALNT14Q96FL9 552 aa13.13□□□□□ -0.31
PNKP-230ENST00000638016 PLECQ15149 4684 aaKnown RBP13.13□□□□□ -0.31
PNKP-230ENST00000638016 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 CEBPZOSA8MTT3 80 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 CLN5O75503 358 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 DEFB135Q30KP9 77 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 TIGITQ495A1 244 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 TCF24Q7RTU0 167 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
PNKP-230ENST00000638016 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 HYDINQ4G0P3 5121 aa13.12□□□□□ -0.31
PNKP-230ENST00000638016 LYSTQ99698 3801 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 CORTO00230 105 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 IGKV1-17P01599 117 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 NMSQ5H8A3 153 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 TMED4Q7Z7H5 227 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 SLC24A4Q8NFF2 622 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 OR4X1Q8NH49 305 aa13.11□□□□□ -0.31
PNKP-230ENST00000638016 DFFBO76075 338 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 HTR2BP41595 481 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 RND2P52198 227 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 EWSR1Q01844 656 aaKnown RBP eCLIP13.1□□□□□ -0.31
PNKP-230ENST00000638016 CCDC190Q86UF4 302 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 TOMM5Q8N4H5 51 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 IL22RA2Q969J5 263 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 GINS3Q9BRX5 216 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 VSIRQ9H7M9 311 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 MAP6D1Q9H9H5 199 aa13.1□□□□□ -0.31
PNKP-230ENST00000638016 C2orf83Q53S99 150 aa13.09□□□□□ -0.31
PNKP-230ENST00000638016 PRSS54Q6PEW0 395 aa13.09□□□□□ -0.31
PNKP-230ENST00000638016 KCNIP3Q9Y2W7 256 aa13.09□□□□□ -0.31
PNKP-230ENST00000638016 AGRNO00468 2067 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 A0A0B4J2A0 478 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 LCE6AA0A183 80 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 IGLC1P0CG04 106 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 NPY1RP25929 384 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 SCGB3A2Q96PL1 93 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 MS4A6AQ9H2W1 248 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 RBKSQ9H477 322 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 SHPKQ9UHJ6 478 aa13.08□□□□□ -0.32
PNKP-230ENST00000638016 S100A5P33763 92 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 APOC4P55056 127 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 TNFRSF9Q07011 255 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 SMCO1Q147U7 214 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 RBMS2Q15434 407 aaKnown RBP13.07□□□□□ -0.32
PNKP-230ENST00000638016 LEMD1Q68G75 181 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 LGI3Q8N145 548 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 SRRQ9GZT4 340 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 HSPB7Q9UBY9 170 aa13.07□□□□□ -0.32
PNKP-230ENST00000638016 A0A0J9YWU9 116 aa13.06□□□□□ -0.32
PNKP-230ENST00000638016 FAUP35544 74 aaKnown RBP13.06□□□□□ -0.32
PNKP-230ENST00000638016 CCR6P51684 374 aa13.06□□□□□ -0.32
PNKP-230ENST00000638016 RPL11P62913 178 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms