RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 GREB1LQ9C091 1923 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 ABHD17AQ96GS6 310 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 MEGF9Q9H1U4 602 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 PILRBQ9UKJ0 227 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 PPP1R27Q86WC6 154 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 FNDC1Q4ZHG4 1894 aaPredicted RBP15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 IGKCP01834 107 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 LINC00312Q9Y6C7 94 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 SAMD5Q5TGI4 173 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 NHP2Q9NX24 153 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 CGAP01215 116 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 C9orf50Q5SZB4 431 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 NR2C2APQ86WQ0 139 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 PRADC1Q9BSG0 188 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 TM2D1Q9BX74 207 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 GSN-AS1Q9NRJ2 163 aa15.26■□□□□ 0.03
CACNA1A-247ENST00000637769 FBLN7Q53RD9 439 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 PLXNA3P51805 1871 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 CHTOPQ9Y3Y2 248 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 H3BUT2 72 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 CCL20P78556 96 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 RHOGP84095 191 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 FUT5Q11128 374 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 ZNF826PQ6ZT77 177 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 KLF12Q9Y4X4 402 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 FOXS1O43638 330 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 RPL32P62910 135 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 STPG1Q5TH74 334 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 PTPN13Q12923 2485 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 UPK2O00526 184 aa15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 ITGBL1O95965 494 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-247ENST00000637769 PLPPR1Q8TBJ4 325 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 VWC2LB2RUY7 222 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 CD28P10747 220 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 COX11Q9Y6N1 276 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 IGKV1D-33P01593 117 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 IGKV1-33P01594 117 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 HS3ST3B1Q9Y662 390 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 IGLV1-36A0A0B4J1U3 117 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 ADARB2-AS1A8MUL3 147 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 UCP1P25874 307 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 NTN1O95631 604 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 ASPHD2Q6ICH7 369 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 NDUFAF3Q9BU61 184 aa15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 PEAR1Q5VY43 1037 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-247ENST00000637769 LEPROTO15243 131 aa15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 PRRC2AP48634 2157 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 CITED1Q99966 193 aa15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 DLX4Q92988 240 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 NRN1Q9NPD7 142 aa15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 OSTCQ9NRP0 149 aa15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 VDAC2P45880 294 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 TRGV4A0A0C4DH28 118 aa15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 FAM166AQ6J272 317 aa15.23■□□□□ 0.03
CACNA1A-247ENST00000637769 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 LAMTOR3Q9UHA4 124 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 EGR1P18146 543 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 DENND4CQ5VZ89 1909 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 ITGB1BP1O14713 200 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 IGKV1D-16P01601 117 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 ZNF708P17019 499 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 MRPL52Q86TS9 123 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 TMEM144Q7Z5S9 345 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 TMEM242Q9NWH2 141 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 MESP2Q0VG99 397 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 ZAR1Q86SH2 424 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 PLEKHB2Q96CS7 222 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 GFRA3O60609 400 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 SLC25A48Q6ZT89 311 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 CHAC1Q9BUX1 264 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 CSPG4Q6UVK1 2322 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 DSCAML1Q8TD84 2053 aa15.22■□□□□ 0.03
CACNA1A-247ENST00000637769 SCO2A0A1W2PP80 73 aa15.21■□□□□ 0.03
CACNA1A-247ENST00000637769 NBR2O15453 112 aa15.21■□□□□ 0.03
CACNA1A-247ENST00000637769 EFEMP2O95967 443 aa15.21■□□□□ 0.03
CACNA1A-247ENST00000637769 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
CACNA1A-247ENST00000637769 ZPLD1Q8TCW7 415 aa15.21■□□□□ 0.03
CACNA1A-247ENST00000637769 ZNF479Q96JC4 524 aa15.21■□□□□ 0.03
CACNA1A-247ENST00000637769 MYO18BQ8IUG5 2567 aa15.21■□□□□ 0.03
CACNA1A-247ENST00000637769 TMEM170AQ8WVE7 144 aa15.21■□□□□ 0.02
CACNA1A-247ENST00000637769 FNDC4Q9H6D8 234 aaPredicted RBP15.21■□□□□ 0.02
CACNA1A-247ENST00000637769 ZNHIT1O43257 154 aa15.21■□□□□ 0.02
CACNA1A-247ENST00000637769 TMEM14DPA8MWL7 114 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 HIST1H4AP62805 103 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 EDA2RQ9HAV5 297 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 SPINK2P20155 84 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 GZMMP51124 257 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 H3BMM0 161 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 FAM208BQ5VWN6 2430 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 RPP25Q9BUL9 199 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 SIRT4Q9Y6E7 314 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 LOC102723996A0A087X1L8 192 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 TRAV2A0A0B4J234 112 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 OVOL1O14753 267 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 TRAV8-1A0A0A6YYK1 113 aa15.2■□□□□ 0.02
CACNA1A-247ENST00000637769 A0A1W2PRE2 83 aa15.19■□□□□ 0.02
CACNA1A-247ENST00000637769 IGKV1D-42A0A075B6H8 117 aa15.19■□□□□ 0.02
CACNA1A-247ENST00000637769 A8MXK9 166 aa15.19■□□□□ 0.02
CACNA1A-247ENST00000637769 PEBP1P30086 187 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-247ENST00000637769 SSBP2P81877 361 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms