RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 RPL23P62829 140 aaKnown RBP4.43□□□□□ -1.7
NEK3-211ENST00000629912 GNB1P62873 340 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PRB3Q04118 309 aaPredicted RBP4.43□□□□□ -1.7
NEK3-211ENST00000629912 PAX8Q06710 450 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 KLRD1Q13241 179 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 ELOBQ15370 118 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 C5orf64Q2M2E5 130 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 KLK9Q2XQG4 91 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 CST9LP1Q5W188 147 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 CTRB2Q6GPI1 263 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PATE2Q6UY27 113 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 ZNF562Q6V9R5 426 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 MIR17HGQ75NE6 70 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 LHFPL4Q7Z7J7 247 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 IQCF2Q8IXL9 164 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 SRSF12Q8WXF0 261 aaKnown RBP4.43□□□□□ -1.7
NEK3-211ENST00000629912 TMEM37Q8WXS4 190 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 C22orf15Q8WYQ4 148 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 C11orf52Q96A22 123 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 ISOC2Q96AB3 205 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 ANAPC16Q96DE5 110 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 ZNF503Q96F45 646 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 ACY3Q96HD9 319 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 AJUBAQ96IF1 538 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 FAM167A-AS1Q96KT0 104 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 UHRF2Q96PU4 802 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 TBX15Q96SF7 602 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PFDN5Q99471 154 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PYGO2Q9BRQ0 406 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 PARLQ9H300 379 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 LPAR2Q9HBW0 351 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 MRPL36Q9P0J6 103 aaKnown RBP4.43□□□□□ -1.7
NEK3-211ENST00000629912 KLK9Q9UKQ9 250 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 HILPDAQ9Y5L2 63 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 LY96Q9Y6Y9 160 aa4.43□□□□□ -1.7
NEK3-211ENST00000629912 NAV3Q8IVL0 2385 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 WNK2Q9Y3S1 2297 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 TRBV24-1A0A075B6N3 115 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 VWC2LB2RUY7 222 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 I3L2K1 104 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 NDUFB4O95168 129 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 CNIH1O95406 144 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 REG1AP05451 166 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 CD99P14209 185 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 GATA2P23769 480 aaPredicted RBP4.42□□□□□ -1.7
NEK3-211ENST00000629912 BRS3P32247 399 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 ATP5G3P48201 142 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 DSCR9P59020 149 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 UBE2G2P60604 165 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 LCN2P80188 198 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 FXYD3Q14802 87 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 PLGLAQ15195 96 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 MMDQ15546 238 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 C10orf113Q5VZT2 155 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 DYNAPQ8N1N2 210 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 TTC9CQ8N5M4 171 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 STXBP6Q8NFX7 210 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 OR4X1Q8NH49 305 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 C10orf105Q8TEF2 133 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 RPUSD4Q96CM3 377 aaKnown RBP4.42□□□□□ -1.7
NEK3-211ENST00000629912 MISP3Q96FF7 219 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 IMMP2LQ96T52 175 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 BPESC1Q9GZL8 116 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 WNT10AQ9GZT5 417 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 BIN3Q9NQY0 253 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 TNFRSF19Q9NS68 423 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 C1RLQ9NZP8 487 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 YTHDF2Q9Y5A9 579 aaKnown RBP4.42□□□□□ -1.7
NEK3-211ENST00000629912 DMRT1Q9Y5R6 373 aa4.42□□□□□ -1.7
NEK3-211ENST00000629912 IGSF10Q6WRI0 2623 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 RELNP78509 3460 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 TRAV30A0A087WSZ9 112 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 C9JCJ5 164 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 PPP1R2P9O14990 202 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 COX7A2P2O60397 106 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 HYPMO75409 117 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 CXCL1P09341 107 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 FAM106CPP0CH98 169 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 BPIFB3P59826 476 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 CX3CL1P78423 397 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 ZNF90Q03938 601 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 ADIRFQ15847 76 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 ZNF674Q2M3X9 581 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 RUSC1-AS1Q66K80 236 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 ZNF343Q6P1L6 599 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 LINC01551Q86U37 167 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 OR51G1Q8NGK1 321 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 OCC1Q8TAD7 63 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 Q8WTZ3 238 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 TMEM190Q8WZ59 177 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 FAM168AQ92567 244 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 PERPQ96FX8 193 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 ZNF48Q96MX3 618 aaPredicted RBP4.41□□□□□ -1.7
NEK3-211ENST00000629912 TCEAL7Q9BRU2 100 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 PIMREGQ9BSJ6 248 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 SLC25A2Q9BXI2 301 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 OR51M1Q9H341 326 aa4.41□□□□□ -1.7
NEK3-211ENST00000629912 ACACBO00763 2458 aa4.4□□□□□ -1.7
NEK3-211ENST00000629912 CACNA1BQ00975 2339 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms