RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 CD59P13987 128 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 IGFBP2P18065 325 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 LOXL3P58215 753 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 ARF6P62330 175 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 PSG5Q15238 335 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 MPV17L2Q567V2 206 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 ST6GALNAC3Q8NDV1 305 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 C1orf162Q8NEQ5 155 aaPredicted RBP7.14□□□□□ -1.27
VCL-207ENST00000624354 HINT2Q9BX68 163 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 V9GYV3 84 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 NDUFS8O00217 210 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 SPINK4O60575 86 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 IGLL1P15814 213 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 SRIP30626 198 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 PRR20EP86478 221 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 PRR20CP86479 221 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 PRR20DP86480 221 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 PRR20BP86481 221 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 PRR20AP86496 221 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 CR1LQ2VPA4 569 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 Q56UQ5 140 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 HES3Q5TGS1 186 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 MBNL2Q5VZF2 373 aaKnown RBP7.14□□□□□ -1.27
VCL-207ENST00000624354 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 DDB2Q92466 427 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 SLC25A10Q9UBX3 287 aaPredicted RBP7.14□□□□□ -1.27
VCL-207ENST00000624354 FOXA2Q9Y261 457 aaPredicted RBP7.14□□□□□ -1.27
VCL-207ENST00000624354 ARL2-SNX15V9GYD0 113 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 KALRNO60229 2985 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 COL8A2P25067 703 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 CRYBB3P26998 211 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 TIGITQ495A1 244 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 CENPWQ5EE01 88 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 MIR17HGQ75NE6 70 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 ZNRF1Q8ND25 227 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 TMEM14BQ9NUH8 114 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 CALYQ9NYX4 217 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 KIR2DL2P43627 348 aaPredicted RBP7.13□□□□□ -1.27
VCL-207ENST00000624354 COX19Q49B96 90 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 FAM71F2Q6NXP2 309 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 VWA1Q6PCB0 445 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 PQLC2Q6ZP29 291 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 ASCL5Q7RTU5 278 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 RAB9BQ9NP90 201 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 CADP27708 2225 aa7.13□□□□□ -1.27
VCL-207ENST00000624354 COL27A1Q8IZC6 1860 aaPredicted RBP7.13□□□□□ -1.27
VCL-207ENST00000624354 IGHV3OR15-7A0A075B7D8 119 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 FNDC10F2Z333 226 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 NUDT3O95989 172 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 DOLPP1Q86YN1 238 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 GCSAMQ8N6F7 178 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 NEUROG1Q92886 237 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 LEAP2Q969E1 77 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 NABP2Q9BQ15 211 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 PLEKHA3Q9HB20 300 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 TECRQ9NZ01 308 aaKnown RBP7.12□□□□□ -1.27
VCL-207ENST00000624354 CENPEQ02224 2701 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 OR7C2O60412 319 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 OR10J4P0C629 311 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 CX3CL1P78423 397 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 GUSBP1Q15486 140 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 WFDC8Q8IUA0 241 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 DEFB125Q8N687 156 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.12□□□□□ -1.27
VCL-207ENST00000624354 ZNF439Q8NDP4 499 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 SH3BGRL2Q9UJC5 107 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 IGHV1-18A0A0C4DH31 117 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 SAP30O75446 220 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 IGLV1-44P01699 117 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 IGHG3P01860 377 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 LINC00869P0C866 280 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 SAA2P0DJI9 122 aaPredicted RBP7.12□□□□□ -1.27
VCL-207ENST00000624354 APOBEC3AP31941 199 aaPredicted RBP7.12□□□□□ -1.27
VCL-207ENST00000624354 TAS2R45P59539 299 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 PSG9Q00887 426 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 CT45A1Q5HYN5 189 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 TMEM136Q6ZRR5 245 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 C1orf229Q6ZS94 237 aaPredicted RBP7.12□□□□□ -1.27
VCL-207ENST00000624354 CT45A3Q8NHU0 189 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 ST6GALNAC6Q969X2 333 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 ADTRPQ96IZ2 230 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 OSTCQ9NRP0 149 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 IDI2-AS1Q9NZ38 188 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 OR51B2Q9Y5P1 312 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 ZGRF1Q86YA3 2104 aa7.12□□□□□ -1.27
VCL-207ENST00000624354 PKDREJQ9NTG1 2253 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 H0YJW9 148 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 J3QR06 171 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 CFHR2P36980 270 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 BVES-AS1Q5T3Y7 98 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 C9orf106Q8NAJ2 232 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
VCL-207ENST00000624354 PRNDQ9UKY0 176 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 MUC21A0A0G2JKD1 596 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 MUC21A0A140T8X8 626 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 BMPR1BO00238 502 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 DLL1O00548 723 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 HSBP1O75506 76 aa7.11□□□□□ -1.27
VCL-207ENST00000624354 SELENOVP59797 346 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms