RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 LOC102724200A0A096LPH7 203 aaPredicted RBP5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 IGHV3-35A0A0C4DH35 117 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 LOC389332A0A1B0GUA5 103 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 IGKV3-15P01624 115 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 OR5AL1P0C617 328 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 SELENOTP62341 195 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 FOXC1Q12948 553 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 AARDQ4LEZ3 155 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 FAM162BQ5T6X4 162 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 TCF24Q7RTU0 167 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF295-AS1Q8N0V1 137 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 LOXL4Q96JB6 756 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 UQCR10Q9UDW1 63 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 CHD3Q12873 2000 aaKnown RBP5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 TEX50A0A1B0GTY4 177 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 PEX7O00628 323 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 NBEAP1P0C6P0 100 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 LMO1P25800 156 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 NHLH1Q02575 133 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 DMRTA1Q5VZB9 504 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 LCN12Q6JVE5 192 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 S100A7AQ86SG5 101 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 KIR3DL3Q8N743 410 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 STXBP6Q8NFX7 210 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 VPS25Q9BRG1 176 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 AAMDCQ9H7C9 122 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 HIGD1CA8MV81 97 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 GNG7O60262 68 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 IGHV1-46P01743 117 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF124Q15973 351 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 GOLT1AQ6ZVE7 132 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF596Q8TC21 504 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 TIMD4Q96H15 378 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 PARD6GQ9BYG4 376 aaPredicted RBP5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 HIGD1AQ9Y241 93 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 VCANP13611 3396 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 MUC21A0A0G2JKD1 596 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 MUC21A0A140T8X8 626 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 PRCDQ00LT1 54 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 CD69Q07108 199 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 MUC21Q5SSG8 566 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 OR8A1Q8NGG7 326 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 OR52E5Q8NH55 327 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 MIEN1Q9BRT3 115 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 CBY1Q9Y3M2 126 aa5.64□□□□□ -1.51
SYNPO2-206ENST00000610556 CDKN1AP38936 164 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 RPL11P62913 178 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 TBR1Q16650 682 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 C1orf194Q5T5A4 169 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 C11orf53Q8IXP5 236 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 OSR1Q8TAX0 266 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 C5orf30Q96GV9 206 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 PMCHL2Q9BQD1 86 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 TMEM191AQ9H0A3 160 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 PLSCR4Q9NRQ2 329 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 MYO15AQ9UKN7 3530 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 RNF24Q9Y225 148 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 POLR3KQ9Y2Y1 108 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 SLC25A15Q9Y619 301 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 SPEGQ15772 3267 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 TRBV9A0A0B4J1U6 114 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 A0A1W2PNU3 283 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 LYNX1G3V0Z9 82 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 NUPR1O60356 82 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 MMP23AO75900 390 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 LEPROTL1O95214 131 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 CD3EP07766 207 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 LYNX1P0DP58 116 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 SFTPCP11686 197 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 DAZAP2Q15038 168 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 PMCHL1Q16048 86 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 SRSF12Q8WXF0 261 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 RAB1CQ92928 201 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 SNHG12Q9BXW3 62 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 FBXL15Q9H469 300 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 RPUSD1Q9UJJ7 312 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 CFAP54Q96N23 3096 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 IGHV3OR16-8A0A075B7F1 116 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF785A8K8V0 405 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 C15orf65H3BRN8 121 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 BMPR1BO00238 502 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 FCER1GP30273 86 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 VDAC2P45880 294 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 NUTF2P61970 127 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 BSPH1Q075Z2 132 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 SCGB2A2Q13296 93 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 MBNL2Q5VZF2 373 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 SLC25A33Q9BSK2 321 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 C19orf24Q9BVV8 132 aa5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 GSX1Q9H4S2 264 aaPredicted RBP5.63□□□□□ -1.51
SYNPO2-206ENST00000610556 PLXNB1O43157 2135 aa5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 F2Z2F3 143 aa5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 SNAI2O43623 268 aa5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 CD24P25063 80 aa5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 MC5RP33032 325 aa5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 DLX1P56177 255 aa5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 SPRNQ5BIV9 151 aa5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF474Q6S9Z5 364 aaPredicted RBP5.62□□□□□ -1.51
SYNPO2-206ENST00000610556 MAP1LC3CQ9BXW4 147 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms