RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 OPRK1P41145 380 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 MFAP2P55001 183 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 ZNF616Q08AN1 781 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 C9orf139Q6ZV77 190 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 MGST2Q99735 147 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 FAM103A1Q9BTL3 118 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 WNT10AQ9GZT5 417 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 PITPNC1Q9UKF7 332 aa13.97□□□□□ -0.17
SHKBP1-224ENST00000600718 H3BUX3 64 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 NDPQ00604 133 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 TMEM41BQ5BJD5 291 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 TMEM219Q86XT9 240 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 MISP3Q96FF7 219 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 FNDC4Q9H6D8 234 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 GSN-AS1Q9NRJ2 163 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 KCNIP2Q9NS61 270 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 RPRMQ9NS64 109 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 ABCA12Q86UK0 2595 aa13.96□□□□□ -0.17
SHKBP1-224ENST00000600718 NPIPB5A8MRT5 1133 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 SMAD7O15105 426 aaKnown RBP13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 EGR2P11161 476 aaPredicted RBP13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 DEFA4P12838 97 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 DEFB112Q30KQ8 113 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 FFAR4Q5NUL3 377 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 TTC9CQ8N5M4 171 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 TEX29Q8N6K0 151 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 GGTLC1Q9BX51 225 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 CSMD2Q7Z408 3487 aa13.96□□□□□ -0.18
SHKBP1-224ENST00000600718 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.95□□□□□ -0.183e-7■■□□□ 13.4
SHKBP1-224ENST00000600718 AGPAT2O15120 278 aa13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 S100A6P06703 90 aa13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 ELLP55199 621 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 BCL6BQ8N143 479 aaPredicted RBP13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 OR2T6Q8NHC8 308 aa13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 HIST1H2BAQ96A08 127 aa13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 HSPB9Q9BQS6 159 aa13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 TUBA4BQ9H853 241 aa13.95□□□□□ -0.18
SHKBP1-224ENST00000600718 MT-ND4LP03901 98 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 FAM209BQ5JX69 171 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 ASPHD1Q5U4P2 390 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 ACSM6Q6P461 480 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 C19orf35Q6ZS72 473 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 C16orf82Q7Z2V1 217 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 OR51M1Q9H341 326 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 VSIRQ9H7M9 311 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 VPS13CQ709C8 3753 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 M0QZK8 103 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 TSPAN15O95858 294 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 RPL29P47914 159 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 ACOT6Q3I5F7 207 aaPredicted RBP13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 SGMS2Q8NHU3 365 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 ACY3Q96HD9 319 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 DMRT1Q9Y5R6 373 aa13.94□□□□□ -0.18
SHKBP1-224ENST00000600718 CYB5BO43169 146 aa13.93□□□□□ -0.18
SHKBP1-224ENST00000600718 LY6EQ16553 131 aa13.93□□□□□ -0.18
SHKBP1-224ENST00000600718 COMMD1Q8N668 190 aa13.93□□□□□ -0.18
SHKBP1-224ENST00000600718 LFNGQ8NES3 379 aa13.93□□□□□ -0.18
SHKBP1-224ENST00000600718 TMEM68Q96MH6 324 aa13.93□□□□□ -0.18
SHKBP1-224ENST00000600718 PXMP4Q9Y6I8 212 aa13.93□□□□□ -0.18
SHKBP1-224ENST00000600718 PRRC2AP48634 2157 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-224ENST00000600718 MDFIC2A0A1B0GVS7 189 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 MT-CO2P00403 227 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 AMY1AP04745 511 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 S100PP25815 95 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 RAB2AP61019 212 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 OR10G4Q8NGN3 311 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 OR10G9Q8NGN4 311 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 OR10G7Q8NGN6 311 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 C22orf15Q8WYQ4 148 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 NPIPB3Q92617 1050 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 SLC45A2Q9UMX9 530 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 PLXNB1O43157 2135 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 IGKV1OR2-108A0A075B7D4 117 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 HBE1P02100 147 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 MIC13Q5XKP0 118 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 RBMS3Q6XE24 437 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 MBD3L1Q8WWY6 194 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 NIT2Q9NQR4 276 aa13.92□□□□□ -0.18
SHKBP1-224ENST00000600718 TRAV1-1A0A0B4J248 108 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 BTBD17A6NE02 478 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 I3L2K1 104 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 OR10J1P30954 320 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 IER3P46695 156 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 RPP25LQ8N5L8 163 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 THAP8Q8NA92 274 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 TMEM116Q8NCL8 245 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 OR5R1Q8NH85 324 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 RCC1LQ96I51 464 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 ATP6V0E1O15342 81 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 IGHV3-48P01763 117 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 PPT1P50897 306 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 RND2P52198 227 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 PRR20EP86478 221 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 PRR20CP86479 221 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 PRR20DP86480 221 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 PRR20BP86481 221 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 PRR20AP86496 221 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 SPSB3Q6PJ21 355 aa13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 ACTR3CQ9C0K3 210 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-224ENST00000600718 SLC39A9Q9NUM3 307 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms