RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 OR2C1O95371 312 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 OXA1LQ15070 435 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 HSD17B13Q7Z5P4 300 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 NDUFA4L2Q9NRX3 87 aa12.29□□□□□ -0.44
SHKBP1-215ENST00000597649 C5orf51A6NDU8 294 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 E7EUB6 86 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 NXPH3O95157 252 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 SLC25A6P12236 298 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 HOXA1P49639 335 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 SPCS3P61009 180 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 PRCDQ00LT1 54 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 C19orf35Q6ZS72 473 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 TTC9CQ8N5M4 171 aa12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-215ENST00000597649 A0A0J9YWU9 116 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 CGB1A6NKQ9 187 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 OR2J3O76001 311 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 OR13C7P0DN81 318 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 DEFA4P12838 97 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 AREGP15514 252 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 CBLN1P23435 193 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 PSMB6P28072 239 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 IAH1Q2TAA2 248 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 C15orf32Q32M92 178 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 SPINK9Q5DT21 86 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 CEMP1Q6PRD7 247 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 NECAP1Q8NC96 275 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 OR10W1Q8NGF6 305 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 OR52E5Q8NH55 327 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 GGTLC1Q9BX51 225 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 MLXQ9UH92 298 aa12.27□□□□□ -0.45
SHKBP1-215ENST00000597649 A0A1B0GW64 132 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 IGLC7A0M8Q6 106 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 NPIPB5A8MRT5 1133 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 LGALS9O00182 355 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 CCSO14618 274 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 CYB5BO43169 146 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 REG1AP05451 166 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 GSG1LQ6UXU4 331 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 SLC16A13Q7RTY0 426 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 ALG5Q9Y673 324 aa12.26□□□□□ -0.45
SHKBP1-215ENST00000597649 LOC102724200A0A096LPH7 203 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 C7orf66A4D0T2 115 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 GOSR2O14653 212 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 GGCTO75223 188 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 MED6O75586 246 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 DEDDO75618 318 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 IGHV3-23P01764 117 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 SNCAP37840 140 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 TNFRSF9Q07011 255 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 AARDQ4LEZ3 155 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 GPHB5Q86YW7 130 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 HEYLQ9NQ87 328 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 DNAH17Q9UFH2 4485 aa12.25□□□□□ -0.45
SHKBP1-215ENST00000597649 TMEM213A2RRL7 107 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 NUPR2A6NF83 97 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 MPTX1A8MV57 137 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 FAM90A26D6RGX4 464 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 WRBO00258 174 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 PITX3O75364 302 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 SCAF4O95104 1147 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 NDUFB8O95169 186 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 SCGB1D2O95969 90 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 CRYGCP07315 174 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 SUB1P53999 127 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 WT1-ASQ06250 92 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 ZBTB8BQ8NAP8 495 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 OR10C1Q96KK4 312 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 FAT2Q9NYQ8 4349 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 HSPB7Q9UBY9 170 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 S4R3C0 116 aa12.24□□□□□ -0.45
SHKBP1-215ENST00000597649 DNAH2Q9P225 4427 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 CTRB1P17538 263 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 NKX2-1P43699 371 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 TM4SF20Q53R12 229 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 CTRB2Q6GPI1 263 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 SLC25A24Q6NUK1 477 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 WFDC3Q8IUB2 231 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 OR2C3Q8N628 320 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 OR1L6Q8NGR2 347 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 C2orf50Q96LR7 162 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 CCDC140Q96MF4 163 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 FANCD2OSQ96PS1 177 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 MED28Q9H204 178 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 RBKSQ9H477 322 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 FBXL7Q9UJT9 491 aa12.23□□□□□ -0.45
SHKBP1-215ENST00000597649 PKHD1P08F94 4074 aa12.22□□□□□ -0.45
SHKBP1-215ENST00000597649 CLEC19AQ6UXS0 136 aa12.22□□□□□ -0.45
SHKBP1-215ENST00000597649 DTD1Q8TEA8 209 aa12.22□□□□□ -0.45
SHKBP1-215ENST00000597649 MAGT1Q9H0U3 335 aa12.22□□□□□ -0.45
SHKBP1-215ENST00000597649 THYN1Q9P016 225 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms