RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 SNCAP37840 140 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 SLC38A11Q08AI6 406 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 ARL16Q0P5N6 197 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 PEA15Q15121 130 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 AKR1C8PQ5T2L2 129 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 OR10P1Q8NGE3 313 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 NABP2Q9BQ15 211 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 TMEM147Q9BVK8 224 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 QTRT1Q9BXR0 403 aaKnown RBP13.59□□□□□ -0.23
CIRBP-235ENST00000591935 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
CIRBP-235ENST00000591935 TMEM140Q9NV12 185 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 UQCC1Q9NVA1 299 aa13.59□□□□□ -0.23
CIRBP-235ENST00000591935 CARHSP1Q9Y2V2 147 aaKnown RBP13.59□□□□□ -0.23
CIRBP-235ENST00000591935 HBE1P02100 147 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 CNTFRP26992 372 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 RAB2AP61019 212 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 CFHR3Q02985 330 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 RAX2Q96IS3 184 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 OR4C12Q96R67 309 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 GGACTQ9BVM4 153 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 SEC11CQ9BY50 192 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 WDR61Q9GZS3 305 aaKnown RBP13.58□□□□□ -0.24
CIRBP-235ENST00000591935 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 SLC35D1Q9NTN3 355 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 KIAA1456Q9P272 454 aa13.58□□□□□ -0.24
CIRBP-235ENST00000591935 FOXA2Q9Y261 457 aaPredicted RBP13.58□□□□□ -0.24
CIRBP-235ENST00000591935 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 NBR2O15453 112 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 SOX15O60248 233 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 IFNA17P01571 189 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 HLA-DRB1P01911 266 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 APOA2P02652 100 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 ATP5IP56385 69 aaPredicted RBP13.57□□□□□ -0.24
CIRBP-235ENST00000591935 ZNF616Q08AN1 781 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 VWC2Q2TAL6 325 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 OSR1Q8TAX0 266 aaPredicted RBP13.57□□□□□ -0.24
CIRBP-235ENST00000591935 FAM213BQ8TBF2 198 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 NARS2Q96I59 477 aaKnown RBP13.57□□□□□ -0.24
CIRBP-235ENST00000591935 RHOVQ96L33 236 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 FKBP11Q9NYL4 201 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 PRNDQ9UKY0 176 aa13.57□□□□□ -0.24
CIRBP-235ENST00000591935 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 APOC3P02656 99 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 PSMB8P28062 276 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 HSPE1P61604 102 aaKnown RBP13.56□□□□□ -0.24
CIRBP-235ENST00000591935 DEFB136Q30KP8 78 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 SVBPQ8N300 66 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 NPBQ8NG41 125 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 OR5AN1Q8NGI8 311 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 C4orf3Q8WVX3 66 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 ZNF257Q9Y2Q1 563 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 COL7A1Q02388 2944 aa13.56□□□□□ -0.24
CIRBP-235ENST00000591935 UPK2O00526 184 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 H2AFB1P0C5Y9 115 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 MC5RP33032 325 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 GUK1Q16774 197 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 C5orf64Q2M2E5 130 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 TMEM177Q53S58 311 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 OR4A47Q6IF82 309 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 OR4A5Q8NH83 315 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 SCRT1Q9BWW7 348 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 TMEM14BQ9NUH8 114 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 BET1LQ9NYM9 111 aa13.55□□□□□ -0.24
CIRBP-235ENST00000591935 C15orf62A8K5M9 175 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 F8W036 122 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 G3V318 75 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 PPIFP30405 207 aaKnown RBP13.54□□□□□ -0.24
CIRBP-235ENST00000591935 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
CIRBP-235ENST00000591935 RUNX1Q01196 453 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 C9orf66Q5T8R8 295 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 SSX9Q7RTT3 188 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 PDPNQ86YL7 162 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 MBD3L1Q8WWY6 194 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 UBE2E2Q96LR5 201 aa13.54□□□□□ -0.24
CIRBP-235ENST00000591935 IGHV7-81A0A0B4J1V7 117 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 H0YJW9 148 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 NDUFA3O95167 84 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 MBP02144 154 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 FHITP49789 147 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 OR2B8PP59922 312 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 RAB11AP62491 216 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 CD69Q07108 199 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 SPSB3Q6PJ21 355 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 MYOZ3Q8TDC0 251 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 RNF5Q99942 180 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 KLK15Q9H2R5 256 aa13.53□□□□□ -0.24
CIRBP-235ENST00000591935 HEYLQ9NQ87 328 aaPredicted RBP13.53□□□□□ -0.24
CIRBP-235ENST00000591935 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 ATP6V0E1O15342 81 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 MPDU1O75352 247 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 KBTBD11O94819 623 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 DLK1P80370 383 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 DEFA5Q01523 94 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 PMS2P11Q13670 270 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 KIAA0141Q14154 515 aaPredicted RBP13.52□□□□□ -0.25
CIRBP-235ENST00000591935 TMEM41BQ5BJD5 291 aa13.52□□□□□ -0.25
CIRBP-235ENST00000591935 OR11H1Q8NG94 326 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms