RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 FLNAP21333 2647 aaKnown RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 RND2P52198 227 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 B2MP61769 119 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 PRR20EP86478 221 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 PRR20CP86479 221 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 PRR20DP86480 221 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 PRR20BP86481 221 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 PRR20AP86496 221 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 ECSCRQ19T08 205 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 SPSB3Q6PJ21 355 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 UNQ5815/PRO19632Q6UWF5 114 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 COMMD1Q8N668 190 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 OR10G4Q8NGN3 311 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 OR10G9Q8NGN4 311 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 OR10G7Q8NGN6 311 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 RCC1LQ96I51 464 aaKnown RBP8.99□□□□□ -0.97
SMAD4-205ENST00000588745 TMEM68Q96MH6 324 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 SLC45A2Q9UMX9 530 aa8.99□□□□□ -0.97
SMAD4-205ENST00000588745 CSPG4Q6UVK1 2322 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 IGKV1D-37A0A075B6S9 117 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 IGHV3-21A0A0B4J1V1 117 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 CTXND1A0A1B0GTU2 59 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 BTBD17A6NE02 478 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 K7EIM0 57 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 IGHV3-48P01763 117 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 HBE1P02100 147 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 IER3P46695 156 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-205ENST00000588745 Q6YL49 198 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 CYP2G1PQ6ZSU1 146 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 SSX7Q7RTT5 188 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 RPP25LQ8N5L8 163 aaKnown RBP8.98□□□□□ -0.97
SMAD4-205ENST00000588745 TMEM116Q8NCL8 245 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 MBD3L1Q8WWY6 194 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 ZNF48Q96MX3 618 aaPredicted RBP8.98□□□□□ -0.97
SMAD4-205ENST00000588745 FANCD2OSQ96PS1 177 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 TMUB1Q9BVT8 246 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 PRDM13Q9H4Q3 707 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 SLC39A9Q9NUM3 307 aa8.98□□□□□ -0.97
SMAD4-205ENST00000588745 TRAV1-1A0A0B4J248 108 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 A0A1B0GV50 99 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 TCRBV4S1A1TA0A5B7 111 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 MAP1LC3B2A6NCE7 125 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 ZFP92A6NM28 416 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 LINC01548A6NM66 108 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 SEC14L6B5MCN3 397 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 LINC00869P0C866 280 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 CDC34P49427 236 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-205ENST00000588745 KLK9Q2XQG4 91 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 AKIRIN2Q53H80 203 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 GCSAMLQ5JQS6 135 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 C9orf152Q5JTZ5 239 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 FAM122CQ6P4D5 195 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 UQCC3Q6UW78 93 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 LCN15Q6UWW0 184 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 SPNS3Q6ZMD2 512 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 BPIFCQ8NFQ6 507 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 OR5T1Q8NG75 326 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 SFT2D1Q8WV19 159 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 ACTR3CQ9C0K3 210 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-205ENST00000588745 MAP1LC3BQ9GZQ8 125 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 SLC25A22Q9H936 323 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 KLK9Q9UKQ9 250 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 ZFHX3Q15911 3703 aa8.97□□□□□ -0.97
SMAD4-205ENST00000588745 TRAV41A0A0B4J266 112 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 ANKRD34BA5PLL1 514 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 I3L521 148 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 IGHG2P01859 326 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 HIST1H1BP16401 226 aaKnown RBP8.96□□□□□ -0.98
SMAD4-205ENST00000588745 SELENOTP62341 195 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 TOR2AQ5JU69 321 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 IL17RELQ6ZVW7 336 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 SLC35E3Q7Z769 313 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 OR4X1Q8NH49 305 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 FAM210AQ96ND0 272 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 TRGV9Q99603 122 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 TNFRSF19Q9NS68 423 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 THYN1Q9P016 225 aa8.96□□□□□ -0.98
SMAD4-205ENST00000588745 CELSR1Q9NYQ6 3014 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 G3V318 75 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 CLN5O75503 358 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 OR2J3O76001 311 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 IGF1P05019 195 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 IGLC1P0CG04 106 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 GATA2P23769 480 aaPredicted RBP8.95□□□□□ -0.98
SMAD4-205ENST00000588745 CCL20P78556 96 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 RAB24Q969Q5 203 aa8.95□□□□□ -0.98
SMAD4-205ENST00000588745 A0A1W2PPV4 95 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 HOXA3O43365 443 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-205ENST00000588745 EIF3GO75821 320 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMAD4-205ENST00000588745 NDUFB8O95169 186 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 SRP14P37108 136 aaKnown RBP8.94□□□□□ -0.98
SMAD4-205ENST00000588745 FGF8P55075 233 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-205ENST00000588745 RHOBP62745 196 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 BLCAPP62952 87 aa8.94□□□□□ -0.98
SMAD4-205ENST00000588745 SRSF3P84103 164 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms