RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SLC45A2Q9UMX9 530 aa4.65□□□□□ -1.67
SDF2-206ENST00000587788 LY96Q9Y6Y9 160 aa4.65□□□□□ -1.67
SDF2-206ENST00000587788 TRAV3A0A0B4J244 114 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 TEX50A0A1B0GTY4 177 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 H0YJW9 148 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 NDUFS8O00217 210 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 YIF1AO95070 293 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 LIPFP07098 398 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 AREGP15514 252 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 PAX1P15863 534 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 HOXA5P20719 270 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 COMPP49747 757 aaPredicted RBP4.64□□□□□ -1.67
SDF2-206ENST00000587788 TAS2R45P59539 299 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 B2MP61769 119 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 RPL23P62829 140 aaKnown RBP4.64□□□□□ -1.67
SDF2-206ENST00000587788 RPL8P62917 257 aaKnown RBP4.64□□□□□ -1.67
SDF2-206ENST00000587788 LCN2P80188 198 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 FABP9Q0Z7S8 132 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 ADIRFQ15847 76 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 HLA-DRB5Q30154 266 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 DEFB113Q30KQ7 82 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 VMA21Q3ZAQ7 101 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 C1orf122Q6ZSJ8 110 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 IQCF2Q8IXL9 164 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 VKORC1L1Q8N0U8 176 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 LINC01356Q8N9X3 169 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 RNASEH2CQ8TDP1 164 aaKnown RBP4.64□□□□□ -1.67
SDF2-206ENST00000587788 TMEM170AQ8WVE7 144 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 TMEM190Q8WZ59 177 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 H1FXQ92522 213 aaKnown RBP4.64□□□□□ -1.67
SDF2-206ENST00000587788 LEAP2Q969E1 77 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 RPUSD4Q96CM3 377 aaKnown RBP4.64□□□□□ -1.67
SDF2-206ENST00000587788 HARBI1Q96MB7 349 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 C12orf57Q99622 126 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 PYGO2Q9BRQ0 406 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 SRD5A3Q9H8P0 318 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 TMEM167BQ9NRX6 74 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 WASHC3Q9Y3C0 194 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 ROS1P08922 2347 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 PLCE1Q9P212 2302 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 SPG11Q96JI7 2443 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 VPS13CQ709C8 3753 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 TANC2Q9HCD6 1990 aa4.64□□□□□ -1.67
SDF2-206ENST00000587788 KIAA2026Q5HYC2 2103 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 TRAV9-1A0A075B6T8 112 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 A0A1W2PPE3 182 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 PPP5D1E7EU14 171 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 DVL1O14640 695 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 NDUFS7O75251 213 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 EIF3GO75821 320 aaKnown RBP eCLIP4.63□□□□□ -1.67
SDF2-206ENST00000587788 MMP23AO75900 390 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 IGHV3-7P01780 117 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 PFN1P07737 140 aaKnown RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 ARL14EPLP0DKL9 152 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 IGHV1-8P0DP01 117 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 S100A2P29034 98 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 GCHFRP30047 84 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 CDKN1AP38936 164 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 GALR1P47211 349 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 CDX1P47902 265 aaPredicted RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 DLX6P56179 175 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 FAM3BP58499 235 aaPredicted RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 SELENOTP62341 195 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 RPL19P84098 196 aaKnown RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 DNLZQ5SXM8 178 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 CST9LP1Q5W188 147 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 MIC13Q5XKP0 118 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 ETFRF1Q6IPR1 90 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 DUX4L9Q6RFH8 374 aaPredicted RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 SPNS3Q6ZMD2 512 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 PQLC2Q6ZP29 291 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 TGIF2LXQ8IUE1 241 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 TEX45Q8NA69 505 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 WFDC11Q8NEX6 87 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 GATAD1Q8WUU5 269 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 ST6GALNAC6Q969X2 333 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 C11orf52Q96A22 123 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 PERPQ96FX8 193 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 CCL19Q99731 98 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 RNF5Q99942 180 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 FOXC2Q99958 501 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 NABP2Q9BQ15 211 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 HINT2Q9BX68 163 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 MRPL32Q9BYC8 188 aaKnown RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 MRPL20Q9BYC9 149 aaKnown RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 TMEM133Q9H2Q1 129 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 NDUFA4L2Q9NRX3 87 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 TECRQ9NZ01 308 aaKnown RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 FUT9Q9Y231 359 aa4.63□□□□□ -1.67
SDF2-206ENST00000587788 AMMECR1Q9Y4X0 333 aaPredicted RBP4.63□□□□□ -1.67
SDF2-206ENST00000587788 USF3Q68DE3 2245 aa4.62□□□□□ -1.67
SDF2-206ENST00000587788 TGIF2-C20orf24A0A0A6YYL0 155 aa4.62□□□□□ -1.67
SDF2-206ENST00000587788 SRRM4A7MD48 611 aaKnown RBP4.62□□□□□ -1.67
SDF2-206ENST00000587788 CORTO00230 105 aa4.62□□□□□ -1.67
SDF2-206ENST00000587788 HMGB3O15347 200 aaKnown RBP4.62□□□□□ -1.67
SDF2-206ENST00000587788 GGCTO75223 188 aaKnown RBP4.62□□□□□ -1.67
SDF2-206ENST00000587788 IGHV2-70P01814 119 aa4.62□□□□□ -1.67
SDF2-206ENST00000587788 IGKV1-16P04430 117 aa4.62□□□□□ -1.67
SDF2-206ENST00000587788 TYMSP04818 313 aa4.62□□□□□ -1.67
SDF2-206ENST00000587788 CXCL1P09341 107 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms