RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 TMEM147Q9BVK8 224 aa0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 ZFC3H1O60293 1989 aaKnown RBP0.45□□□□□ -2.34
SMCHD1-207ENST00000581711 TOPBP1Q92547 1522 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 DOCK5Q9H7D0 1870 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 TRBV6-8A0A0A6YYG3 113 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 EEF1E1-BLOC1S5C9J1V9 151 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 DCTN3O75935 186 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 ISG15P05161 165 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 AP2S1P53680 142 aaPredicted RBP0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 RAB4BP61018 213 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 RAB5BP61020 215 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 CNBPP62633 177 aaKnown RBP0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 HBA1P69905 142 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 SPANXN3Q5MJ09 141 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 DEFB128Q7Z7B8 93 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 PHF13Q86YI8 300 aaPredicted RBP0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 OR4E2Q8NGC2 313 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 OR5A1Q8NGJ0 315 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 TERB2Q8NHR7 220 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 DDI1Q8WTU0 396 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 IMP4Q96G21 291 aaKnown RBP0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 LSM5Q9Y4Y9 91 aaKnown RBP0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 BSNQ9UPA5 3926 aa0.44□□□□□ -2.34
SMCHD1-207ENST00000581711 ANKRD11Q6UB99 2663 aaPredicted RBP0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 HECW1Q76N89 1606 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 FAM208BQ5VWN6 2430 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 DEFA1P59665 94 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 MAGOHP61326 146 aaKnown RBP0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 KHDC3LQ587J8 217 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 CDKL4Q5MAI5 379 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 CD200R1LQ6Q8B3 271 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 DPPA3Q6W0C5 159 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 MIR17HGQ75NE6 70 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 PTH2Q96A98 100 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 OPTNQ96CV9 577 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 MRPS26Q9BYN8 205 aaKnown RBP0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 ULBP3Q9BZM4 244 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 C11orf68Q9H3H3 251 aaKnown RBP0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 C9orf84Q5VXU9 1444 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 ZFYVE26Q68DK2 2539 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 ACACBO00763 2458 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 MAP3K5Q99683 1374 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 MCM3APO60318 1980 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 WDFY4Q6ZS81 3184 aa0.43□□□□□ -2.34
SMCHD1-207ENST00000581711 PDZD2O15018 2839 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 TGIF2-C20orf24A0A0A6YYL0 155 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 KCNK1O00180 336 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 TGOLN2O43493 480 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 TNNC2P02585 160 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 CALB1P05937 261 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 OR5G3P0C626 314 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 HIST2H3PS2Q5TEC6 136 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 GDF5OSQ5U4N7 250 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 FBXL12Q9NXK8 326 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 GUCA1BQ9UMX6 200 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 FASNP49327 2511 aaKnown RBP0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 BIRC6Q9NR09 4857 aa0.42□□□□□ -2.34
SMCHD1-207ENST00000581711 A0A0D9SG52 128 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 PQLC2LA1A4F0 135 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 SMIM23A6NLE4 172 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 M0R036 132 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 IFNA5P01569 189 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 HIST1H1EP10412 219 aaKnown RBP0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 MGST1P10620 155 aaKnown RBP0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 MIFP14174 115 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 NKX2-5P52952 324 aaPredicted RBP0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 SPCS3P61009 180 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 RHEBQ15382 184 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 HIST3H3Q16695 136 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 SPANXN5Q5MJ07 72 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 CCDC122Q5T0U0 273 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 C8orf74Q6P047 294 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 TMEM86BQ8N661 226 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 OTUD6BQ8N6M0 293 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 OR52R1Q8NGF1 315 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 SLC35B4Q969S0 331 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 OR52E6Q96RD3 313 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 COMMD5Q9GZQ3 224 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 ACER3Q9NUN7 267 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 PKIGQ9Y2B9 76 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 HMCN2Q8NDA2 5059 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 CELSR3Q9NYQ7 3312 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 ZANQ9Y493 2812 aa0.41□□□□□ -2.34
SMCHD1-207ENST00000581711 ACANP16112 2415 aa0.4□□□□□ -2.34
SMCHD1-207ENST00000581711 DENND4CQ5VZ89 1909 aa0.4□□□□□ -2.34
SMCHD1-207ENST00000581711 E9PCH4 1651 aa0.4□□□□□ -2.34
SMCHD1-207ENST00000581711 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 TRAV3A0A0B4J244 114 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 BUB1B-PAK6H3BSN5 160 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 PSMD12O00232 456 aaPredicted RBP0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 NIPSNAP2O75323 286 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 LYZL6O75951 148 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 AHSA1O95433 338 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 HLA-DRB1P01911 266 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 CD79AP11912 226 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 ZNF25P17030 456 aaPredicted RBP0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 SULT1A1P50225 295 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 PSME3P61289 254 aa0.4□□□□□ -2.35
SMCHD1-207ENST00000581711 OR2F1Q13607 317 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms