RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 JTBO76095 146 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 PF4V1P10720 104 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 FCGR2BP31994 310 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 TPPP2P59282 170 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 AKR1C1Q04828 323 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 C15orf32Q32M92 178 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 ZNF329Q86UD4 541 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 UBAC2Q8NBM4 344 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 TMEM116Q8NCL8 245 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 MYOZ3Q8TDC0 251 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 TAF15Q92804 592 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 CXorf58Q96LI9 332 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 ATP6V0BQ99437 205 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 WDR83OSQ9Y284 106 aa13.03□□□□□ -0.32
CDK5RAP3-215ENST00000579780 C2CD3Q4AC94 2353 aa13.02□□□□□ -0.32
CDK5RAP3-215ENST00000579780 SMCO3A2RU48 225 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 MFSD2BA6NFX1 497 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 NDUFB8O95169 186 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 IFNA5P01569 189 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 RND2P52198 227 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 EIF5AP63241 154 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 GAMTQ14353 236 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TREML4Q6UXN2 200 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 CENPVQ7Z7K6 275 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 SLC51BQ86UW2 128 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 KLHDC1Q8N7A1 406 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 OR4X1Q8NH49 305 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 MS4A10Q96PG2 267 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ZNF471Q9BX82 626 aaPredicted RBP13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 WDR61Q9GZS3 305 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 NPVFQ9HCQ7 196 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 C21orf62Q9NYP8 219 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 BOLA1Q9Y3E2 137 aa13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 LSM4Q9Y4Z0 139 aaKnown RBP13.02□□□□□ -0.33
CDK5RAP3-215ENST00000579780 NF1P21359 2839 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 A0A0G2JLM5 398 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 A0A1B0GUS0 222 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 CLPSL1A2RUU4 121 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 MPDU1O75352 247 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 MDKP21741 143 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 RAB9AP51151 201 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 SRSF2Q01130 221 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 DEFA5Q01523 94 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 RPL7L1Q6DKI1 246 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 C10orf99Q6UWK7 81 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 THAP8Q8NA92 274 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 OR4X2Q8NGF9 303 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ZNF502Q8TBZ5 544 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 EEF1AKMT3Q96AZ1 226 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TXN2Q99757 166 aa13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 MRPL36Q9P0J6 103 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-215ENST00000579780 IGHV3-21A0A0B4J1V1 117 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TPT1P13693 172 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 FGF7P21781 194 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 NPBWR1P48145 328 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 MFAP4P55083 255 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ATP5G2Q06055 141 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 MLANAQ16655 118 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 FAM209BQ5JX69 171 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ACSM6Q6P461 480 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TEPPQ6URK8 271 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ACY3Q96HD9 319 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ARV1Q9H2C2 271 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 KLK15Q9H2R5 256 aa13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 GAR1Q9NY12 217 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TRBV7-1A0A0A6YYK4 115 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 CLN5O75503 358 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 SCGB2A1O75556 95 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 PROK1P58294 105 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 NPIPB3Q92617 1050 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 CCDC140Q96MF4 163 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 RNF114Q9Y508 228 aa12.99□□□□□ -0.33
CDK5RAP3-215ENST00000579780 IGKV1OR2-108A0A075B7D4 117 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 F8W735 103 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 BTNL8Q6UX41 500 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 OR5AU1Q8NGC0 362 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 GINS3Q9BRX5 216 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 KCNIP2Q9NS61 270 aa12.98□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TRAV30A0A087WSZ9 112 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 RPLP1P05386 114 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 IGLC1P0CG04 106 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 KIAA0141Q14154 515 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 Q56UQ5 140 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 LCNL1Q6ZST4 164 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 BAP18Q8IXM2 172 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 ZNF491Q8N8L2 437 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 HSD17B11Q8NBQ5 300 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 WFDC12Q8WWY7 111 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 GNPNAT1Q96EK6 184 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 UBE2E2Q96LR5 201 aa12.97□□□□□ -0.33
CDK5RAP3-215ENST00000579780 TRGV9Q99603 122 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms