RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SUPT4H1P63272 117 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 BAK1Q16611 211 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 TMEM116Q8NCL8 245 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 GALNT14Q96FL9 552 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 TMEM56-RWDD3S4R434 201 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 RYR3Q15413 4870 aa9.48□□□□□ -0.89
NPLOC4-213ENST00000573519 IGKV3-7A0A075B6H7 116 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 TRAV14DV4A0A0A6YYC5 116 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 IGHV7-4-1A0A0J9YVY3 117 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 OR4C46A6NHA9 309 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 CORTO00230 105 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 RNASE2P10153 161 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 FCGR2BP31994 310 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 OPRK1P41145 380 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 TFPI2P48307 235 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 LYZL2Q7Z4W2 148 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 FAM219AQ8IW50 185 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 RNF2Q99496 336 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 SDHCQ99643 169 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 NDUFA13Q9P0J0 144 aa9.47□□□□□ -0.89
NPLOC4-213ENST00000573519 INS-IGF2F8WCM5 200 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 CHEK1O14757 476 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 INPP1P49441 399 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 CCR6P51684 374 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 SPCS3P61009 180 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 TRIQKQ629K1 86 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 IL22RA2Q969J5 263 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 ZNF414Q96IQ9 312 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 OR10C1Q96KK4 312 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 GINS3Q9BRX5 216 aa9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 HEYLQ9NQ87 328 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-213ENST00000573519 CEBPZOSA8MTT3 80 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 APOC4P55056 127 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 MLANAQ16655 118 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 AARDQ4LEZ3 155 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 TOMM20LQ6UXN7 152 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 ZNF600Q6ZNG1 722 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 LGI3Q8N145 548 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 SLC25A21Q9BQT8 299 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 PUS1Q9Y606 427 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPLOC4-213ENST00000573519 A0A0B4J2A0 478 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 TMEM50AO95807 157 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 SULT1A3P0DMM9 295 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 SULT1A4P0DMN0 295 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 ANXA3P12429 323 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 VAMP1P23763 118 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 BMI1P35226 326 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 RPL11P62913 178 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 PPP1R1AQ13522 171 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 NMSQ5H8A3 153 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 FNDC4Q9H6D8 234 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 MRPL36Q9P0J6 103 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 SHPKQ9UHJ6 478 aa9.44□□□□□ -0.9
NPLOC4-213ENST00000573519 CLN5O75503 358 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 APOHP02749 345 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 HTR2BP41595 481 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 PAFAH1B2P68402 229 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 TMEM128Q5BJH2 165 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 PVRIGQ6DKI7 326 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 TCF24Q7RTU0 167 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 WFDC3Q8IUB2 231 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 IL17DQ8TAD2 202 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 DEDD2Q8WXF8 326 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 ST8SIA2Q92186 375 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 OVOL2Q9BRP0 275 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 FLVCR2Q9UPI3 526 aa9.43□□□□□ -0.9
NPLOC4-213ENST00000573519 A0A1B0GU03 582 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 RPS10-NUDT3A0A1W2PQS6 291 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 DNASE2O00115 360 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 SFT2D2O95562 160 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 IL7P13232 177 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 SRPXP78539 464 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 SMCO1Q147U7 214 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 ZNF124Q15973 351 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 BSXQ3C1V8 233 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 CENPSQ8N2Z9 138 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 OR4X1Q8NH49 305 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 OR1S1Q8NH92 325 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 TMEM170AQ8WVE7 144 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 RBKSQ9H477 322 aa9.42□□□□□ -0.9
NPLOC4-213ENST00000573519 LCE6AA0A183 80 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 NAP1L6A6NFF2 107 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 SPRY2O43597 315 aa9.41□□□□□ -0.9
NPLOC4-213ENST00000573519 DFFBO76075 338 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms