RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 AGFG2O95081 481 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 CFHR2P36980 270 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 GCSAMQ8N6F7 178 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 NHLRC2Q8NBF2 726 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 DEFB124Q8NES8 71 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 OR1L8Q8NGR8 309 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 SNRNP40Q96DI7 357 aaKnown RBP12.77□□□□□ -0.37
COMMD4-215ENST00000566843 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 FZR1Q9UM11 496 aa12.77□□□□□ -0.37
COMMD4-215ENST00000566843 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.37
COMMD4-215ENST00000566843 A0A1B0GXF2 115 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 CRXO43186 299 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-215ENST00000566843 FABP6P51161 128 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 RPL8P62917 257 aaKnown RBP12.76□□□□□ -0.37
COMMD4-215ENST00000566843 RHOGP84095 191 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 FAM120AOSQ5T036 256 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 FAM162BQ5T6X4 162 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 OR9G1Q8NH87 305 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 LINC00479Q96M42 142 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 C7orf69Q9H7B7 122 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 ST20Q9HBF5 79 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 RNASE2P10153 161 aaKnown RBP12.76□□□□□ -0.37
COMMD4-215ENST00000566843 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
COMMD4-215ENST00000566843 RNFT1Q5M7Z0 435 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 RNASEKQ6P5S7 137 aaKnown RBP12.76□□□□□ -0.37
COMMD4-215ENST00000566843 KIR3DL3Q8N743 410 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 ZNF596Q8TC21 504 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 ZNF714Q96N38 554 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 TMEM70Q9BUB7 260 aa12.76□□□□□ -0.37
COMMD4-215ENST00000566843 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-215ENST00000566843 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
COMMD4-215ENST00000566843 TEX50A0A1B0GTY4 177 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 A0A1W2PN81 502 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 CEACAM8P31997 349 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-215ENST00000566843 CD69Q07108 199 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 MORN5Q5VZ52 161 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 ZNF329Q86UD4 541 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 OR4C5Q8NGB2 326 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 LEAP2Q969E1 77 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 RAB9BQ9NP90 201 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 CLCF1Q9UBD9 225 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 PCNX2A6NKB5 2137 aa12.75□□□□□ -0.37
COMMD4-215ENST00000566843 TRAV5A0A0B4J249 113 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 PEX7O00628 323 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 CECR9P0C854 216 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 REG1BP48304 166 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 GUSBP1Q15486 140 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 VWA1Q6PCB0 445 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 RIF1Q5UIP0 2472 aaKnown RBP12.74□□□□□ -0.37
COMMD4-215ENST00000566843 A0A1W2PNU3 283 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-215ENST00000566843 GPR6P46095 362 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-215ENST00000566843 MLANAQ16655 118 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 HES3Q5TGS1 186 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 C1orf162Q8NEQ5 155 aaPredicted RBP12.74□□□□□ -0.37
COMMD4-215ENST00000566843 CACNG8Q8WXS5 425 aa12.74□□□□□ -0.37
COMMD4-215ENST00000566843 SPAARA0A1B0GVQ0 90 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 PPBPP02775 128 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 CD46P15529 392 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 ZNRF1Q8ND25 227 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 IGHV3OR15-7A0A075B7D8 119 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 KBTBD11-OT1A0A1B0GTJ5 212 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 VWC2LB2RUY7 222 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 IGLV1-44P01699 117 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 HIST1H1EP10412 219 aaKnown RBP12.73□□□□□ -0.37
COMMD4-215ENST00000566843 ETFRF1Q6IPR1 90 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 CLEC2AQ6UVW9 174 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-215ENST00000566843 CLEC5AQ9NY25 188 aa12.73□□□□□ -0.37
COMMD4-215ENST00000566843 FAM186AA6NE01 2351 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 TAX1BP3O14907 124 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 CIDEAO60543 219 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 OR2Z1Q8NG97 314 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
COMMD4-215ENST00000566843 HOXC12P31275 282 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 MYCNOSP40205 109 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 CHCHD1Q96BP2 118 aaKnown RBP12.72□□□□□ -0.37
COMMD4-215ENST00000566843 SMIM12Q96EX1 92 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 PAXXQ9BUH6 204 aa12.72□□□□□ -0.37
COMMD4-215ENST00000566843 MED13Q9UHV7 2174 aa12.71□□□□□ -0.37
COMMD4-215ENST00000566843 VAMP3Q15836 100 aa12.71□□□□□ -0.37
COMMD4-215ENST00000566843 ZNF841Q6ZN19 808 aa12.71□□□□□ -0.37
COMMD4-215ENST00000566843 ASCL5Q7RTU5 278 aa12.71□□□□□ -0.37
COMMD4-215ENST00000566843 KNTC1P50748 2209 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 SYS1-DBNDD2H3BUS1 97 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 CORTO00230 105 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 DLL1O00548 723 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 FSTL3O95633 263 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 LHBP01229 141 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 CT45A6P0DMU7 189 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 CT45A5P0DMU8 189 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 CT45A7P0DMV0 189 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 PYYP10082 97 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 MPV17L2Q567V2 206 aa12.71□□□□□ -0.38
COMMD4-215ENST00000566843 BVES-AS1Q5T3Y7 98 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 442.1 ms