RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FBLN7Q53RD9 439 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 TEPPQ6URK8 271 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 CFHR4Q92496 578 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 RAB24Q969Q5 203 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 FBXL15Q9H469 300 aa7.54□□□□□ -1.2
LINC00838-201ENST00000562956 CTXND1A0A1B0GTU2 59 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 LOC102723971A0A1B0GUV8 181 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 GZMBP10144 247 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 CEACAM3P40198 252 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 ATP5IP56385 69 aaPredicted RBP7.53□□□□□ -1.2
LINC00838-201ENST00000562956 GNB1P62873 340 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 RELQ04864 619 aaPredicted RBP7.53□□□□□ -1.2
LINC00838-201ENST00000562956 ACOT6Q3I5F7 207 aaPredicted RBP7.53□□□□□ -1.2
LINC00838-201ENST00000562956 PPP1R27Q86WC6 154 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 MMD2Q8IY49 270 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 DYNAPQ8N1N2 210 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 NECAP1Q8NC96 275 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 FAM210BQ96KR6 192 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 ACTR3CQ9C0K3 210 aaPredicted RBP7.53□□□□□ -1.2
LINC00838-201ENST00000562956 SMDT1Q9H4I9 107 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 PXMP4Q9Y6I8 212 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 UBR5O95071 2799 aaPredicted RBP7.53□□□□□ -1.2
LINC00838-201ENST00000562956 IGKV1OR2-108A0A075B7D4 117 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 IGLC7A0M8Q6 106 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 FCN1O00602 326 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 SRP19P09132 144 aaKnown RBP7.53□□□□□ -1.2
LINC00838-201ENST00000562956 APELAP0DMC3 54 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 P2RX4Q99571 388 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 SNHG12Q9BXW3 62 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 LPAR2Q9HBW0 351 aa7.53□□□□□ -1.2
LINC00838-201ENST00000562956 FNDC10F2Z333 226 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 TOX4O94842 621 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 HSPB1P04792 205 aaKnown RBP7.52□□□□□ -1.21
LINC00838-201ENST00000562956 BCL2P10415 239 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 COMPP49747 757 aaPredicted RBP7.52□□□□□ -1.21
LINC00838-201ENST00000562956 SSBP2P81877 361 aaPredicted RBP7.52□□□□□ -1.21
LINC00838-201ENST00000562956 BATFQ16520 125 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 NRGNQ92686 78 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 NDUFAF3Q9BU61 184 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 ACTL6BO94805 426 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 NPSP0C0P6 89 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 AREGP15514 252 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 RPL27AP46776 148 aaKnown RBP7.52□□□□□ -1.21
LINC00838-201ENST00000562956 CDC34P49427 236 aaPredicted RBP7.52□□□□□ -1.21
LINC00838-201ENST00000562956 CD69Q07108 199 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 TMEM144Q7Z5S9 345 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 STPG3Q8N7X2 389 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 OR2T6Q8NHC8 308 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 FAM168AQ92567 244 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 TBX15Q96SF7 602 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 RNF5Q99942 180 aa7.52□□□□□ -1.21
LINC00838-201ENST00000562956 ATP5J2P56134 94 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 MMDQ15546 238 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
LINC00838-201ENST00000562956 CRYBG3Q68DQ2 2970 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 IGHV4-61A0A0C4DH41 118 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 A1L4Q6 167 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 MOSP00540 346 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 IGHV3-48P01763 117 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 AMBPP02760 352 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 MAS1LP35410 378 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 PLGLAQ15195 96 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 C10orf105Q8TEF2 133 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 GATAD1Q8WUU5 269 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 NIPSNAP3BQ9BS92 247 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 PIMREGQ9BSJ6 248 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 ELOA3CA0A087WX78 387 aaPredicted RBP7.51□□□□□ -1.21
LINC00838-201ENST00000562956 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 FOXH1O75593 365 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 LINC00869P0C866 280 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 RPL29P47914 159 aaKnown RBP7.51□□□□□ -1.21
LINC00838-201ENST00000562956 MFAP2P55001 183 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 LGALS4P56470 323 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 PRR20EP86478 221 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 PRR20CP86479 221 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 PRR20DP86480 221 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 PRR20BP86481 221 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 PRR20AP86496 221 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 RAB31Q13636 194 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 CACNG8Q8WXS5 425 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 EAF1Q96JC9 268 aaPredicted RBP7.51□□□□□ -1.21
LINC00838-201ENST00000562956 SLC45A2Q9UMX9 530 aa7.51□□□□□ -1.21
LINC00838-201ENST00000562956 CSMD2Q7Z408 3487 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 A0A1W2PPV4 95 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 NBR2O15453 112 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC00838-201ENST00000562956 PMS2P11Q13670 270 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 HES1Q14469 280 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 MINOS1Q5TGZ0 78 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 RNASEH2CQ8TDP1 164 aaKnown RBP7.5□□□□□ -1.21
LINC00838-201ENST00000562956 TVP23CQ96ET8 276 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 PERPQ96FX8 193 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 ACY3Q96HD9 319 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 AJUBAQ96IF1 538 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 SEPSECSQ9HD40 501 aaKnown RBP7.5□□□□□ -1.21
LINC00838-201ENST00000562956 VAX2Q9UIW0 290 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 MINOS1-NBL1R4GNA1 71 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 CSMD1Q96PZ7 3565 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 IGHV4-30-2A0A087WSY4 118 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms