RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 C1orf159Q96HA4 380 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 TMEM121BQ9BXQ6 578 aaPredicted RBP7.66□□□□□ -1.18
CDH1-205ENST00000562836 VSIRQ9H7M9 311 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 C20orf141Q9NUB4 165 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 COA3Q9Y2R0 106 aaPredicted RBP7.66□□□□□ -1.18
CDH1-205ENST00000562836 TMSB15BA0A087X1C1 80 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 UQCRQO14949 82 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 CRXO43186 299 aaPredicted RBP7.66□□□□□ -1.18
CDH1-205ENST00000562836 SFTPDP35247 375 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 MRPL2Q5T653 305 aaKnown RBP7.66□□□□□ -1.18
CDH1-205ENST00000562836 PMS2CLQ68D20 193 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 TMEM200BQ69YZ2 307 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 ZNF493Q6ZR52 646 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 TMEM171Q8WVE6 324 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 IL1F10Q8WWZ1 152 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 FAM3DQ96BQ1 224 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 GNB1LQ9BYB4 327 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 NHP2Q9NX24 153 aaKnown RBP7.66□□□□□ -1.18
CDH1-205ENST00000562836 SPANXCQ9NY87 97 aa7.66□□□□□ -1.18
CDH1-205ENST00000562836 MDFIC2A0A1B0GVS7 189 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 K7EMI3 77 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 M0R2P5 195 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 MORN4Q8NDC4 146 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 ZNF740Q8NDX6 193 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 OR51H1Q8NH63 302 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 MLST8Q9BVC4 326 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 HHLA3Q9XRX5 114 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 DLL1O00548 723 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 OVOL1O14753 267 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 SPRY3O43610 288 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 AVPP01185 164 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 ZNF726P1Q15940 193 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 TMEFF1Q8IYR6 380 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 TDHQ8IZJ6 230 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 C15orf53Q8NAA6 179 aa7.65□□□□□ -1.18
CDH1-205ENST00000562836 APCSP02743 223 aa7.65□□□□□ -1.19
CDH1-205ENST00000562836 TEN1Q86WV5 123 aa7.65□□□□□ -1.19
CDH1-205ENST00000562836 BCL6BQ8N143 479 aaPredicted RBP7.65□□□□□ -1.19
CDH1-205ENST00000562836 TRAV8-2A0A0B4J237 113 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 RENP00797 406 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 ADAMTSL4Q6UY14 1074 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 LRRC29Q8WV35 223 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 C4orf45Q96LM5 186 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 VKORC1Q9BQB6 163 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 ATG2BQ96BY7 2078 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 H7C1H1 209 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 ASIPP42127 132 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 CLDN2P57739 230 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 POLR2LP62875 67 aaKnown RBP7.64□□□□□ -1.19
CDH1-205ENST00000562836 OR5C1Q8NGR4 320 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 C10orf105Q8TEF2 133 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 BRK1Q8WUW1 75 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 TMEM147Q9BVK8 224 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
CDH1-205ENST00000562836 MYO9BQ13459 2157 aa7.64□□□□□ -1.19
CDH1-205ENST00000562836 COL4A4P53420 1690 aaPredicted RBP7.63□□□□□ -1.19
CDH1-205ENST00000562836 SPRY2O43597 315 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 GYPBP06028 91 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 SGSHP51688 502 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 CD164Q04900 197 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 PMAIP1Q13794 54 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 NABP1Q96AH0 204 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 ELSPBP1Q96BH3 223 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 PATJQ8NI35 1801 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 C16orf97H3BN30 126 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 PRRG2O14669 202 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 FOXC1Q12948 553 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 TMEM187Q14656 261 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 KCTD18Q6PI47 426 aaPredicted RBP7.63□□□□□ -1.19
CDH1-205ENST00000562836 Q6ZS92 163 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 RPS19BP1Q86WX3 136 aaKnown RBP7.63□□□□□ -1.19
CDH1-205ENST00000562836 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 CEND1Q8N111 149 aa7.63□□□□□ -1.19
CDH1-205ENST00000562836 CIARTQ8N365 385 aaPredicted RBP7.63□□□□□ -1.19
CDH1-205ENST00000562836 LOC730098B7Z3J9 87 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 LY6LH3BQJ8 138 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 K7ESM1 405 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 GRNP28799 593 aaKnown RBP7.62□□□□□ -1.19
CDH1-205ENST00000562836 LEPP41159 167 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 RPS4XP62701 263 aaKnown RBP7.62□□□□□ -1.19
CDH1-205ENST00000562836 RSPO1Q2MKA7 263 aaPredicted RBP7.62□□□□□ -1.19
CDH1-205ENST00000562836 ANKRD37Q7Z713 158 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 GTSCR1Q86UQ5 136 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 LINC00311Q8N616 119 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 STARD5Q9NSY2 213 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 IL36BQ9NZH7 164 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 KIAA1671Q9BY89 1806 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 CST7O76096 145 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 IGLV3-25P01717 112 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 P01737 135 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 ECI1P42126 302 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 DYNLT3P51808 116 aa7.62□□□□□ -1.19
CDH1-205ENST00000562836 LSM4Q9Y4Z0 139 aaKnown RBP7.62□□□□□ -1.19
CDH1-205ENST00000562836 LYPD3O95274 346 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 TRACP01848 142 aa7.61□□□□□ -1.19
CDH1-205ENST00000562836 LGALS1P09382 135 aaKnown RBP7.61□□□□□ -1.19
CDH1-205ENST00000562836 ZNF136P52737 540 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms