RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SPACA3Q8IXA5 215 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
RABGGTA-220ENST00000560998 SPINK4O60575 86 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 RBMXL2O75526 392 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 CEACAM3P40198 252 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 RBPJQ06330 500 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 SLAQ13239 276 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 EFNB3Q15768 340 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 RTL8BQ17RB0 113 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 MIC13Q5XKP0 118 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 UFSP1Q6NVU6 142 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 PQLC2Q6ZP29 291 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 RNASE7Q9H1E1 156 aaKnown RBP11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 SCRT2Q9NQ03 307 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 DUSP13Q9UII6 198 aa11.42□□□□□ -0.58
RABGGTA-220ENST00000560998 IGHV3-13P01766 116 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 PRDX2P32119 198 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 RPS16P62249 146 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 OR13A1Q8NGR1 328 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 OR2V2Q96R30 315 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 TECRQ9NZ01 308 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 LSM4Q9Y4Z0 139 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 GAGE10A6NGK3 116 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 SRRM5B3KS81 715 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 PRSS46E5RG02 174 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 TCL1AP56279 114 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 RIPPLY3P57055 190 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 RPL30P62888 115 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 ERASQ7Z444 233 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 DOLPP1Q86YN1 238 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 ZNF808Q8N4W9 903 aaPredicted RBP11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 TPRX1Q8N7U7 411 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 OR52E5Q8NH55 327 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 FAM57AQ8TBR7 257 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 CHRDL1Q9BU40 450 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 MS4A5Q9H3V2 200 aa11.41□□□□□ -0.58
RABGGTA-220ENST00000560998 TRAV8-6A0A0B4J262 113 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 SMIM17P0DL12 118 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 GLRXP35754 106 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 CFHR2P36980 270 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 RAB31Q13636 194 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 FAM231DQ6ZW35 169 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 ATP5L2Q7Z4Y8 100 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 FAM90A1Q86YD7 464 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 CACNA1DQ01668 2161 aa11.4□□□□□ -0.58
RABGGTA-220ENST00000560998 IGKV1D-17A0A075B6S4 117 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 C15orf65H3BRN8 121 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 PPOXP50336 477 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 SLC35B1P78383 322 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 FXYD3Q14802 87 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 PSG3Q16557 428 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 SPRNQ5BIV9 151 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 TRAT1Q6PIZ9 186 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 IGF2BP2-AS1Q96M15 143 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 DCTN5Q9BTE1 182 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 C17orf98A8MV24 154 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 EDDM3AQ14507 147 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 FAM120AOSQ5T036 256 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 OR1B1Q8NGR6 318 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 HSD17B10Q99714 261 aaKnown RBP11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 CADP27708 2225 aa11.39□□□□□ -0.59
RABGGTA-220ENST00000560998 CEP250Q9BV73 2442 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 IGHV3-43A0A0B4J1X8 118 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 C7orf71A4D174 169 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 SPINT2O43291 252 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 SAP30O75446 220 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 OR5AL1P0C617 328 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 IGHV3-43DP0DP04 118 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 BRWD1-AS2P59051 145 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 MOGAT3Q86VF5 341 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 GCSAMQ8N6F7 178 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 RFESDQ8TAC1 157 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 ST6GALNAC6Q969X2 333 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 GRAMD2BQ96HH9 432 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 GVINP1Q7Z2Y8 2422 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 USF3Q68DE3 2245 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 BOD1L1Q8NFC6 3051 aa11.38□□□□□ -0.59
RABGGTA-220ENST00000560998 IGLV3-9A0A075B6K5 115 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 IGHV3OR15-7A0A075B7D8 119 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 FNDC10F2Z333 226 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 IGLV2-8P01709 118 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 ADH4P08319 380 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 GPR183P32249 361 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 GPR6P46095 362 aaPredicted RBP11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 PRSS57Q6UWY2 283 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 NEGR1Q7Z3B1 354 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 MBD6Q96DN6 1003 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 SERTAD4Q9NUC0 356 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 MUC6Q6W4X9 2439 aa11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 LOC102724200A0A096LPH7 203 aaPredicted RBP11.37□□□□□ -0.59
RABGGTA-220ENST00000560998 MGST3O14880 152 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 294.7 ms