RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 OR56B1Q8NGI3 324 aa6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 PYDC1Q8WXC3 89 aa6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 DGCR14Q96DF8 476 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 RAB3CQ96E17 227 aa6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 TMEM80Q96HE8 168 aa6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 BCL7BQ9BQE9 202 aa6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 NIPSNAP3BQ9BS92 247 aa6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 QTRT1Q9BXR0 403 aaKnown RBP6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 PTTG2Q9NZH5 202 aa6.33□□□□□ -1.4
SNRPA1-208ENST00000559686 A0A087WWL8 130 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 K7EIM0 57 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 UPK2O00526 184 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 SSX5O60225 188 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 DIRAS3O95661 229 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 CDK1P06493 297 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 TRAPPC2P0DI81 140 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 TRAPPC2BP0DI82 140 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 TALDO1P37837 337 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 PCP4P48539 62 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 WT1-ASQ06250 92 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 CNPY1Q3B7I2 92 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 KCTD21Q4G0X4 260 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 HSD17B12Q53GQ0 312 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 ZNF66Q6ZN08 573 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 LYPD1Q8N2G4 141 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 ZNF485Q8NCK3 441 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 DUSP18Q8NEJ0 188 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 DMBX1Q8NFW5 382 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 ZNRF2Q8NHG8 242 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 SLC25A46Q96AG3 418 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 MISP3Q96FF7 219 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 OR10C1Q96KK4 312 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 FAM210BQ96KR6 192 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 HSD17B10Q99714 261 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 BET1LQ9NYM9 111 aa6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 AK6Q9Y3D8 172 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 F11RQ9Y624 299 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-208ENST00000559686 LOC102723971A0A1B0GUV8 181 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 SMIM31A0A1B0GVY4 71 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 RPS10-NUDT3A0A1W2PQS6 291 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 IRGMA1A4Y4 181 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 HSBP1L1C9JCN9 74 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 SULT1C2O00338 296 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 DENRO43583 198 aaKnown RBP6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 NUDT3O95989 172 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 HTR2BP41595 481 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 XGP55808 180 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 RAB11BQ15907 218 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 SPAG16Q8N0X2 631 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 PQLC1Q8N2U9 271 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 LHFPL5Q8TAF8 219 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 PHYHIPQ92561 330 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 GFI1Q99684 422 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 GINS3Q9BRX5 216 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 SLC25A32Q9H2D1 315 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 DKK2Q9UBU2 259 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 ELF5Q9UKW6 265 aaPredicted RBP6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 OR2W1Q9Y3N9 320 aa6.31□□□□□ -1.4
SNRPA1-208ENST00000559686 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 TEX50A0A1B0GTY4 177 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 EFCAB10A6NFE3 127 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 K7EQG2 157 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 SLC17A2O00624 439 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 MYL12BO14950 172 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 IGKV3-20P01619 116 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 HLA-DQB1P01920 261 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 GNG2P59768 71 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 HAMPP81172 84 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 ST3GAL4Q11206 333 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 EIF4EBP1Q13541 118 aaPredicted RBP6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 PSMG4Q5JS54 123 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 HES5Q5TA89 166 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 TOMM20LQ6UXN7 152 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 GPR141Q7Z602 305 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 NXF2Q9GZY0 626 aaKnown RBP6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 VSIRQ9H7M9 311 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 NSG2Q9Y328 171 aa6.3□□□□□ -1.4
SNRPA1-208ENST00000559686 TRAV2A0A0B4J234 112 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 TMEM272A0A1B0GTI8 110 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 GNG7O60262 68 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 CD5P06127 495 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 WNT4P56705 351 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 FAM3BP58499 235 aaPredicted RBP6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 DAD1P61803 113 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 ZNF773Q6PK81 442 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 GSG1LQ6UXU4 331 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 OR1L8Q8NGR8 309 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 SECTM1Q8WVN6 248 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 FAM3DQ96BQ1 224 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 MOB3AQ96BX8 217 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 SRSF8Q9BRL6 282 aaKnown RBP6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 C1QTNF4Q9BXJ3 329 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 CCL28Q9NRJ3 127 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 NUDT15Q9NV35 164 aa6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 PUS1Q9Y606 427 aaKnown RBP eCLIP6.29□□□□□ -1.4
SNRPA1-208ENST00000559686 RFNGQ9Y644 331 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms