RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GGTLC1Q9BX51 225 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 HEYLQ9NQ87 328 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-208ENST00000558827 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-208ENST00000558827 SCP2D1Q9UJQ7 156 aa9.32□□□□□ -0.92
SMAD3-208ENST00000558827 PUS1Q9Y606 427 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMAD3-208ENST00000558827 STARD9Q9P2P6 4700 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 TRAV14DV4A0A0A6YYC5 116 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 A0A1B0GU03 582 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 C15orf62A8K5M9 175 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 TSPAN4O14817 238 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 NPBWR1P48145 328 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 SUB1P53999 127 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMAD3-208ENST00000558827 SPCS3P61009 180 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 TMEM187Q14656 261 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 ODF3L2Q3SX64 289 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 TIGITQ495A1 244 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 LYZL2Q7Z4W2 148 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 TMED4Q7Z7H5 227 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 ST8SIA2Q92186 375 aa9.31□□□□□ -0.92
SMAD3-208ENST00000558827 SPAG8Q99932 426 aaPredicted RBP9.31□□□□□ -0.92
SMAD3-208ENST00000558827 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-208ENST00000558827 SURF2Q15527 256 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-208ENST00000558827 TCF24Q7RTU0 167 aa9.3□□□□□ -0.92
SMAD3-208ENST00000558827 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
SMAD3-208ENST00000558827 RABL2AQ9UBK7 228 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-208ENST00000558827 RABL2BQ9UNT1 228 aa9.3□□□□□ -0.92
SMAD3-208ENST00000558827 KCNIP3Q9Y2W7 256 aa9.3□□□□□ -0.92
SMAD3-208ENST00000558827 LINC00854A0A1B0GVQ3 168 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 OR4C46A6NHA9 309 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 DFFBO76075 338 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 FCGR2BP31994 310 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-208ENST00000558827 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
SMAD3-208ENST00000558827 SUPT4H1P63272 117 aaKnown RBP9.29□□□□□ -0.92
SMAD3-208ENST00000558827 ZNF79Q15937 498 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 ZNF600Q6ZNG1 722 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 FAM219AQ8IW50 185 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 TOMM5Q8N4H5 51 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 OVOL2Q9BRP0 275 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 TMEM56-RWDD3S4R434 201 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 V9GYH0 126 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 SACSQ9NZJ4 4579 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
SMAD3-208ENST00000558827 INS-IGF2F8WCM5 200 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 CLN5O75503 358 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 B3GALNT1O75752 331 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 SULT1A3P0DMM9 295 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 SULT1A4P0DMN0 295 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 S100A5P33763 92 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 PVRIGQ6DKI7 326 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 TMEM170AQ8WVE7 144 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 TRIM63Q969Q1 353 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 OR10C1Q96KK4 312 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 SCGB3A2Q96PL1 93 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 RBKSQ9H477 322 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 ZFAND3Q9H8U3 227 aa9.28□□□□□ -0.92
SMAD3-208ENST00000558827 DNASE2O00115 360 aaPredicted RBP9.27□□□□□ -0.93
SMAD3-208ENST00000558827 IFNA10P01566 189 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 VAMP1P23763 118 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 HTR2BP41595 481 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 RND2P52198 227 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 RBMS2Q15434 407 aaKnown RBP9.27□□□□□ -0.93
SMAD3-208ENST00000558827 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 FAM90A2PQ658T7 463 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 PRSS54Q6PEW0 395 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 FAM24BQ8N5W8 94 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 SLC24A4Q8NFF2 622 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 OR52E5Q8NH55 327 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 ACY3Q96HD9 319 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 GINS3Q9BRX5 216 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 RBM38Q9H0Z9 239 aaKnown RBP9.27□□□□□ -0.93
SMAD3-208ENST00000558827 RABAC1Q9UI14 185 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 AGRNO00468 2067 aa9.27□□□□□ -0.93
SMAD3-208ENST00000558827 RYR2Q92736 4967 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 CORTO00230 105 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 IGKV1-17P01599 117 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 NPY1RP25929 384 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 FAUP35544 74 aaKnown RBP9.26□□□□□ -0.93
SMAD3-208ENST00000558827 CCR6P51684 374 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 LEMD1Q68G75 181 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 CCDC190Q86UF4 302 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 LGI3Q8N145 548 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 OR4X1Q8NH49 305 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 OR1S1Q8NH92 325 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 NPIPB3Q92617 1050 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
SMAD3-208ENST00000558827 PAIP2BQ9ULR5 123 aaKnown RBP9.26□□□□□ -0.93
SMAD3-208ENST00000558827 A0A0B4J2A0 478 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 RPS10-NUDT3A0A1W2PQS6 291 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 IAPPP10997 89 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 ANXA3P12429 323 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 NPPCP23582 126 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 DEFB131AP59861 70 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 EWSR1Q01844 656 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMAD3-208ENST00000558827 TNFRSF9Q07011 255 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 PMS2P11Q13670 270 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 SMCO1Q147U7 214 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 AARDQ4LEZ3 155 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 C2orf83Q53S99 150 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 NMSQ5H8A3 153 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms