RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	MALRD1	Q5VYJ5	2156 aa		10.26	□□□□□ -0.77
TMPO-212	ENST00000556029	FABP2	P12104	132 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	ODF3L1	Q8IXM7	274 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	SFRP2	Q96HF1	295 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	MS4A5	Q9H3V2	200 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	IGKV3OR2-268	A0A0C4DH90	116 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	C1QTNF9B	B2RNN3	333 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	LMO1	P25800	156 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HSPE1	P61604	102 aa	Known RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	TFF3	Q07654	80 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	KIR3DL3	Q8N743	410 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	OR4A5	Q8NH83	315 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	RAB1B	Q9H0U4	201 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	ACSF3	Q4G176	576 aa	Predicted RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	FAM74A4	Q5TZK3	123 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BK	O60814	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	MT-ND6	P03923	174 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BJ	P06899	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	C8orf88	P0DMB2	117 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BO	P23527	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BB	P33778	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BD	P58876	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BC	P62807	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST2H2BE	Q16778	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	C12orf54	Q6X4T0	127 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BH	Q93079	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BN	Q99877	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	HIST1H2BM	Q99879	126 aa		10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	PSMG3	Q9BT73	122 aa	Predicted RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	TBL2	Q9Y4P3	447 aa	Known RBP	10.25	□□□□□ -0.77
TMPO-212	ENST00000556029	IGHV3-66	A0A0C4DH42	116 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	IGKV1-5	P01602	117 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	LEMD1	Q68G75	181 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	CALY	Q9NYX4	217 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	TRBV6-6	A0A0A6YYG2	114 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	TRAV1-1	A0A0B4J248	108 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	TYMS	P04818	313 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	SRP14	P37108	136 aa	Known RBP	10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	STPG3	Q8N7X2	389 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	RAX	Q9Y2V3	346 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	TLN2	Q9Y4G6	2542 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	SCO2	A0A1W2PP80	73 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	LOXL3	P58215	753 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	HERVK_113	P61574	105 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	LINC01560	Q8TB33	94 aa		10.24	□□□□□ -0.77
TMPO-212	ENST00000556029	IGHV3OR16-10	A0A075B7F0	116 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	C17orf98	A8MV24	154 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	IGKV1-39	P01597	117 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	IGKV1D-39	P04432	117 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	PF4V1	P10720	104 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	ZNF714	Q96N38	554 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	SNCG	O76070	127 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	IGHV3-23	P01764	117 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	C1QTNF9	P0C862	333 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	PLA2G2C	Q5R387	149 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	DNLZ	Q5SXM8	178 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	LHFPL4	Q7Z7J7	247 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	TMEM183A	Q8IXX5	376 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	LINC00469	Q8N7U9	141 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	TMEM160	Q9NX00	188 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	HLA-DRB1	P01911	266 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	ZNF645	Q8N7E2	425 aa		10.23	□□□□□ -0.77
TMPO-212	ENST00000556029	GCHFR	P30047	84 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	PMCHL1	Q16048	86 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	FAM90A2P	Q658T7	463 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	ZNF497	Q6ZNH5	498 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	MBD3L1	Q8WWY6	194 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	SDF2L1	Q9HCN8	221 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	C1RL	Q9NZP8	487 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	TMEM78	Q5T7P6	136 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	LYRM7	Q5U5X0	104 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029		Q6P435	159 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	NUDT11	Q96G61	164 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	ZNF729	A6NN14	1252 aa	Predicted RBP	10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	MPDU1	O75352	247 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	IL18BP	O95998	194 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	NAA38	Q9BRA0	125 aa	Known RBP	10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	C12orf77	C9JDV5	145 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	IGFBP2	P18065	325 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	PYY3	Q5JQD4	70 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	GCSAML	Q5JQS6	135 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	MDS2	Q8NDY4	140 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	OR5R1	Q8NH85	324 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	C16orf92	Q96LL3	132 aa		10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	RNASE7	Q9H1E1	156 aa	Known RBP	10.22	□□□□□ -0.77
TMPO-212	ENST00000556029	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.21	□□□□□ -0.77	2e-6	■■■■□ 23.4
TMPO-212	ENST00000556029	CA1	P00915	261 aa	Predicted RBP	10.21	□□□□□ -0.77
TMPO-212	ENST00000556029	ZNF726P1	Q15940	193 aa		10.21	□□□□□ -0.77
TMPO-212	ENST00000556029	ZNF585B	Q52M93	769 aa		10.21	□□□□□ -0.77
TMPO-212	ENST00000556029	PLXNB1	O43157	2135 aa		10.21	□□□□□ -0.77
TMPO-212	ENST00000556029	NDUFS6	O75380	124 aa	Known RBP	10.21	□□□□□ -0.78
TMPO-212	ENST00000556029	SPACA3	Q8IXA5	215 aa		10.21	□□□□□ -0.78
TMPO-212	ENST00000556029	DEFB104A	Q8WTQ1	72 aa		10.21	□□□□□ -0.78
TMPO-212	ENST00000556029	GATAD1	Q8WUU5	269 aa		10.21	□□□□□ -0.78
TMPO-212	ENST00000556029	SERF1A	O75920	110 aa		10.21	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms