RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 IGHV3OR16-8A0A075B7F1 116 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 H0Y8G0 127 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 SERF1AO75920 110 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 CNIH1O95406 144 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 SRP14P37108 136 aaKnown RBP11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 VWC2Q2TAL6 325 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 EAF1Q96JC9 268 aaPredicted RBP11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 TBX15Q96SF7 602 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 ELOVL5Q9NYP7 299 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF835Q9Y2P0 537 aa11.11□□□□□ -0.63
PRPF40B-209ENST00000548825 USP9YO00507 2555 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 IGHV3-35A0A0C4DH35 117 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 VENTXO95231 258 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 PKIAP61925 76 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 ADTRPQ96IZ2 230 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 MRPL36Q9P0J6 103 aaKnown RBP11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 TGOLN2O43493 480 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 GPR6P46095 362 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 PRCDQ00LT1 54 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 ACTL10Q5JWF8 245 aa11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 SSBP4Q9BWG4 385 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
PRPF40B-209ENST00000548825 CELSR1Q9NYQ6 3014 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 RBP4P02753 201 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 AREGP15514 252 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 SLC25A48Q6ZT89 311 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 CTSZQ9UBR2 303 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 TAS2R45P59539 299 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 TDRG1Q3Y452 100 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 ZNF439Q8NDP4 499 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 ST6GALNAC3Q8NDV1 305 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 SLC25A5P05141 298 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 LYZP61626 148 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 IBA57Q5T440 356 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 TMEM144Q7Z5S9 345 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 BTF3L4Q96K17 158 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 SCNM1Q9BWG6 230 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 FBXL15Q9H469 300 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 FNDC4Q9H6D8 234 aaPredicted RBP11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 TUBG2Q9NRH3 451 aa11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 LSM4Q9Y4Z0 139 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-209ENST00000548825 POLQO75417 2590 aa11.08□□□□□ -0.63
PRPF40B-209ENST00000548825 H0YJW9 148 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 ZNF253O75346 499 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 AMTP48728 403 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 JOSD1Q15040 202 aaPredicted RBP11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 FAM168AQ92567 244 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 CORO2AQ92828 525 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 LINC00312Q9Y6C7 94 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 MYO18BQ8IUG5 2567 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 ZNF137PP52743 207 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 TCF15Q12870 199 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 RUSC1-AS1Q66K80 236 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 OR52E5Q8NH55 327 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 SLC25A33Q9BSK2 321 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 PAXXQ9BUH6 204 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 INSIG2Q9Y5U4 225 aa11.08□□□□□ -0.64
PRPF40B-209ENST00000548825 PRSS46E5RG02 174 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 THBDP07204 575 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 CGB3P0DN86 165 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 CGB7P0DN87 165 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 ARF6P62330 175 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 IQCJQ1A5X6 159 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 OR4C13Q8NGP0 309 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 DNAJC4Q9NNZ3 241 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 BSNQ9UPA5 3926 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 C8orf88P0DMB2 117 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 SRIP30626 198 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 MFAP2P55001 183 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 UBE2G1P62253 170 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 CD69Q07108 199 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 RNASE6Q93091 150 aaKnown RBP11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 RAI1Q7Z5J4 1906 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 PIEZO1Q92508 2521 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 TMEM178BH3BS89 294 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 TMEM68Q96MH6 324 aa11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 AMMECR1Q9Y4X0 333 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-209ENST00000548825 FCN3O75636 299 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 CFHR2P36980 270 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 CDKN1AP38936 164 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 TMEM167BQ9NRX6 74 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 TRAV8-1A0A0A6YYK1 113 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 IGHV1-69-2A0A0G2JMI3 117 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 PGPA6NDG6 321 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 E7EQL1 145 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 VMA21Q3ZAQ7 101 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 TNFRSF19Q9NS68 423 aa11.06□□□□□ -0.64
PRPF40B-209ENST00000548825 IL36BQ9NZH7 164 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms