RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 OPN1MW2P0DN77 364 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 OPN1MW3P0DN78 364 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 RNASE2P10153 161 aaKnown RBP3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 HIST1H1BP16401 226 aaKnown RBP3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 S100A7P31151 101 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 PPT1P50897 306 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 PRB3Q04118 309 aaPredicted RBP3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 FXYD3Q14802 87 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 BTNL8Q6UX41 500 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 CLEC9AQ6UXN8 241 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 ZNF562Q6V9R5 426 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 Q8N6K4 173 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 OR5R1Q8NH85 324 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 SSMEM1Q8WWF3 244 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 P2RX4Q99571 388 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 NPCDR1Q9BY65 106 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 SH3BGRL3Q9H299 93 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 WFDC1Q9HC57 220 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 SEPSECSQ9HD40 501 aaKnown RBP3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 F11RQ9Y624 299 aaKnown RBP3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 USP9XQ93008 2570 aaPredicted RBP3.98□□□□□ -1.77
AC078880.2-201ENST00000547948 FAM208BQ5VWN6 2430 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 ARFGEF3Q5TH69 2177 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 DIDO1Q9BTC0 2240 aaKnown RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 A0A096LNT2 108 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 A0A1W2PPV4 95 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 IGLC7A0M8Q6 106 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 ZFP92A6NM28 416 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 PMS2P5A8MQ11 134 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 NPIPB5A8MRT5 1133 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 KRBOX1C9JBD0 128 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 I3L521 148 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 IGHV4-31P0DP07 118 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 M6PRP20645 277 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 CNTFRP26992 372 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 ELLP55199 621 aaPredicted RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 TAS2R45P59539 299 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 SELENOTP62341 195 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 RUNX1Q01196 453 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 WT1-ASQ06250 92 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 ARL16Q0P5N6 197 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 HNF4GQ14541 408 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 C10orf55Q5SWW7 151 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 RUSC1-AS1Q66K80 236 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 BRD3OSQ6XYD6 125 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 C9orf139Q6ZV77 190 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 TMEM144Q7Z5S9 345 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 CENPVQ7Z7K6 275 aaPredicted RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 HAPLN4Q86UW8 402 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 EIF4E3Q8N5X7 224 aaKnown RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 OR1L4Q8NGR5 311 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 MARC2Q969Z3 335 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 BSCL2Q96G97 398 aaPredicted RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 ACY3Q96HD9 319 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 NARS2Q96I59 477 aaKnown RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 CXorf58Q96LI9 332 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 RBM14Q96PK6 669 aaKnown RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 PFDN5Q99471 154 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 RNF2Q99496 336 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 SLC25A33Q9BSK2 321 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 RSG1Q9BU20 258 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 C19orf24Q9BVV8 132 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 GGTLC1Q9BX51 225 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 ACTR3CQ9C0K3 210 aaPredicted RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 HRH4Q9H3N8 390 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 SMDT1Q9H4I9 107 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 GAR1Q9NY12 217 aaKnown RBP3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 PXMP4Q9Y6I8 212 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 NBASA2RRP1 2371 aa3.97□□□□□ -1.77
AC078880.2-201ENST00000547948 LRRK2Q5S007 2527 aa3.96□□□□□ -1.77
AC078880.2-201ENST00000547948 PRR14LQ5THK1 2151 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 DCHS2Q6V1P9 2916 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 PKDREJQ9NTG1 2253 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 DSCAMO60469 2012 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 TRAV30A0A087WSZ9 112 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 A0A0U1RQK1 487 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 CTXND1A0A1B0GTU2 59 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 MAP1LC3B2A6NCE7 125 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 MFSD2BA6NFX1 497 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 TEX22C9J3V5 150 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 PRSS46E5RG02 174 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 H3BUX3 64 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 AGPAT2O15120 278 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 ELANEP08246 267 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 IGHV4-38-2P0DP08 117 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 MYOD1P15172 320 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 CTRB1P17538 263 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 ZP3P21754 424 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 PPIFP30405 207 aaKnown RBP3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 RPL29P47914 159 aaKnown RBP3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 NPBWR1P48145 328 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 CDC34P49427 236 aaPredicted RBP3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 KRTAP10-9P60411 292 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 B2MP61769 119 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 RHOBP62745 196 aa3.96□□□□□ -1.78
AC078880.2-201ENST00000547948 CX3CL1P78423 397 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms