RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 M0QZ24 198 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 HLA-DQA1P01909 254 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 CLEC3BP05452 202 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 SP1P08047 785 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 LINC00869P0C866 280 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 SCGB1C2P0DMR2 95 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 APOBEC3AP31941 199 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-203ENST00000547825 FOXG1P55316 489 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-203ENST00000547825 RPL39P5Q59GN2 51 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 ZNF324BQ6AW86 544 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-203ENST00000547825 PRNTQ86SH4 94 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 Q8IYB0 196 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 CPEB3Q8NE35 698 aaKnown RBP4.55□□□□□ -1.68
LIMA1-203ENST00000547825 NPIPB3Q92617 1050 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 OR2V2Q96R30 315 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 SAP30LQ9HAJ7 183 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 OOEPA6NGQ2 149 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 CORTO00230 105 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 GNG7O60262 68 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 IGHMP01871 453 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 REG1AP05451 166 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 CSN1S1P47710 185 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 FAM162BQ5T6X4 162 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 C12orf54Q6X4T0 127 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 LINC01551Q86U37 167 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 OR4S2Q8NH73 311 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 IL36BQ9NZH7 164 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 AMMECR1Q9Y4X0 333 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-203ENST00000547825 YTHDF2Q9Y5A9 579 aaKnown RBP4.55□□□□□ -1.68
LIMA1-203ENST00000547825 DYSFO75923 2080 aa4.55□□□□□ -1.68
LIMA1-203ENST00000547825 hCG_38984A0A1B0GV85 526 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 A0A1W2PRS3 328 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 hADV38S2A0JD32 116 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 VENTXO95231 258 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 MT-ND6P03923 174 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 PFN1P07737 140 aaKnown RBP4.54□□□□□ -1.68
LIMA1-203ENST00000547825 IGFBP2P18065 325 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 TIMP3P35625 211 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 IL15RAQ13261 267 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 MPV17L2Q567V2 206 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 SAPCD1Q5SSQ6 148 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 MIR17HGQ75NE6 70 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 MOB3BQ86TA1 216 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 OR8G5Q8NG78 346 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 YPEL4Q96NS1 127 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 NABP2Q9BQ15 211 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 PAXXQ9BUH6 204 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 ZFP30Q9Y2G7 519 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 IGHV5-10-1A0A0J9YXX1 117 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 SPAARA0A1B0GVQ0 90 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 F5H697 171 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 H3BUT2 72 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 HIST1H1EP10412 219 aaKnown RBP4.54□□□□□ -1.68
LIMA1-203ENST00000547825 GATA3P23771 443 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 CA7P43166 264 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 KLF3P57682 345 aaPredicted RBP4.54□□□□□ -1.68
LIMA1-203ENST00000547825 MZT1Q08AG7 82 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 FAM53AQ6NSI3 398 aaPredicted RBP4.54□□□□□ -1.68
LIMA1-203ENST00000547825 C5orf17Q8NAS9 161 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 CCL17Q92583 94 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 C18orf15Q96N68 181 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 SF3B5Q9BWJ5 86 aaKnown RBP4.54□□□□□ -1.68
LIMA1-203ENST00000547825 TCF19Q9Y242 345 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 MGAQ8IWI9 3026 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 IGKV3D-11A0A0A0MRZ8 115 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 A6NDN8 102 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 C12orf77C9JDV5 145 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 SYNGR3O43761 229 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 CIDEAO60543 219 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 LMO1P25800 156 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 HOXA4Q00056 320 aaPredicted RBP4.54□□□□□ -1.68
LIMA1-203ENST00000547825 DAZAP2Q15038 168 aaPredicted RBP4.54□□□□□ -1.68
LIMA1-203ENST00000547825 FAM201AQ5SY85 155 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 TPTE2P1Q5T6R2 138 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 C10orf113Q5VZT2 155 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 SPATA31B1PQ5VZV4 182 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 ZNRF1Q8ND25 227 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 PLPPR1Q8TBJ4 325 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 FAM222BQ8WU58 562 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 MBD3L1Q8WWY6 194 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 HARBI1Q96MB7 349 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 TMEM70Q9BUB7 260 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 DECR2Q9NUI1 292 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 HSPB8Q9UJY1 196 aa4.54□□□□□ -1.68
LIMA1-203ENST00000547825 TRGV5A0A0B4J1U4 118 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 A0A0G2JMM0 328 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 A0A1W2PPB8 328 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 hDV102S1A0JD36 115 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 FAM90A7PA6NKC0 464 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 FAM90A22PA8MWA6 464 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 KIR3DP1A8MWS1 328 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 FAM90A12PA8MX19 464 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 FAM90A23PA8MXZ1 464 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 H3BVH4 76 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 RBFOX2O43251 390 aaKnown RBP eCLIP4.53□□□□□ -1.68
LIMA1-203ENST00000547825 ZNF324O75467 553 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-203ENST00000547825 KLF7O75840 302 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-203ENST00000547825 IGKV1-5P01602 117 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 UMODP07911 640 aa4.53□□□□□ -1.68
LIMA1-203ENST00000547825 IL6RP08887 468 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms