RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 FGF8P55075 233 aaPredicted RBP13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 BSXQ3C1V8 233 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 AKIRIN2Q53H80 203 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 SMUG1Q53HV7 270 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 VMO1Q7Z5L0 202 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 NABP2Q9BQ15 211 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 COMMD5Q9GZQ3 224 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 TMEM133Q9H2Q1 129 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 NAT8Q9UHE5 227 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 WASHC3Q9Y3C0 194 aa13.81□□□□□ -0.2
RBFOX1-207ENST00000547338 IGHV1-69DA0A0B4J2H0 117 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 TMEM89A2RUT3 159 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 PDE6DO43924 150 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 CA2P00918 260 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 IGHV1-69P01742 117 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 PRTN3P24158 256 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 HNF4GQ14541 408 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 TMEM144Q7Z5S9 345 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 KIR3DL3Q8N743 410 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 YPEL4Q96NS1 127 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 C20orf24Q9BUV8 137 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 MRPL20Q9BYC9 149 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 ONECUT1Q9UBC0 465 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 ZNF727A8MUV8 499 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 CXorf1O96002 111 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 MT-CO2P00403 227 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 COMPP49747 757 aaPredicted RBP13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 SUB1P53999 127 aaKnown RBP eCLIP13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 RPL8P62917 257 aaKnown RBP13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 SSX2Q16385 188 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 TMEM241Q24JQ0 296 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 CYP2G1PQ6ZSU1 146 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 TGIF2LXQ8IUE1 241 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 PNKDQ8N490 385 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 TMEM170AQ8WVE7 144 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 SLC35E1Q96K37 410 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 HARBI1Q96MB7 349 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 SLC25A22Q9H936 323 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 NDUFA4L2Q9NRX3 87 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 PXMP4Q9Y6I8 212 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 ARL2-SNX15V9GYD0 113 aa13.8□□□□□ -0.2
RBFOX1-207ENST00000547338 SRRM4A7MD48 611 aaKnown RBP13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 F6UZH7 168 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 CLDN34H7C241 214 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 IGKV1-16P04430 117 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 STAG3L2P0CL84 134 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 STAG3L3P0CL85 134 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 SAA1P0DJI8 122 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 CEBPGP53567 150 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 CD81P60033 236 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 RHOBP62745 196 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 VMA21Q3ZAQ7 101 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 BEND2Q8NDZ0 799 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 MGST2Q99735 147 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 RNF5Q99942 180 aa13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 AMMECR1Q9Y4X0 333 aaPredicted RBP13.79□□□□□ -0.2
RBFOX1-207ENST00000547338 RNASE1P07998 156 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 FBP1P09467 338 aa13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 BPIFB3P59826 476 aa13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 KLRD1Q13241 179 aa13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 HCP5Q6MZN7 132 aa13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 C11orf42Q8N5U0 333 aa13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 TEX45Q8NA69 505 aa13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 NBEAL1Q6ZS30 2694 aa13.78□□□□□ -0.2
RBFOX1-207ENST00000547338 A0A0U1RQK1 487 aa13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 HOXA3O43365 443 aaPredicted RBP13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 CLN5O75503 358 aa13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 AKR1C3P42330 323 aa13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 RND2P52198 227 aa13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 RPS16P62249 146 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 Q6YL49 198 aa13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 C1orf122Q6ZSJ8 110 aa13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 RNASEH2CQ8TDP1 164 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-207ENST00000547338 M0R1W7 72 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 YIF1AO95070 293 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 OPN1MWP04001 364 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 OPN1MW2P0DN77 364 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 OPN1MW3P0DN78 364 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 B2MP61769 119 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 HLA-DRB5Q30154 266 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 FAM24BQ8N5W8 94 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 RNF2Q99496 336 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 SMIM7Q9BQ49 75 aa13.76□□□□□ -0.21
RBFOX1-207ENST00000547338 RNASE2P10153 161 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 PRR20EP86478 221 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 PRR20CP86479 221 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 PRR20DP86480 221 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 PRR20BP86481 221 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 PRR20AP86496 221 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 AJUBAQ96IF1 538 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 SSX3Q99909 188 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 HINT2Q9BX68 163 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 CLEC7AQ9BXN2 247 aa13.75□□□□□ -0.21
RBFOX1-207ENST00000547338 IGLV1-47P01700 117 aa13.74□□□□□ -0.21
RBFOX1-207ENST00000547338 ERVFRD-1P60508 538 aa13.74□□□□□ -0.21
RBFOX1-207ENST00000547338 HABP2Q14520 560 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-207ENST00000547338 OR4F5Q8NH21 305 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms