RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CD69Q07108 199 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 PSG5Q15238 335 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 RPEL1Q2QD12 228 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 KRTCAP3Q53RY4 240 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 CENPWQ5EE01 88 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 FAM71F2Q6NXP2 309 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 Q6ZWC4 215 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 MOB3BQ86TA1 216 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 MMD2Q8IY49 270 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 C8orf31Q8N9H6 132 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 OR1L6Q8NGR2 347 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 CMTM2Q8TAZ6 248 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 SNRNP40Q96DI7 357 aaKnown RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 FAM167A-AS1Q96KT0 104 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 IGF2BP2-AS1Q96M15 143 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF714Q96N38 554 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 WFIKKN1Q96NZ8 548 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 MS4A10Q96PG2 267 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 SLC25A33Q9BSK2 321 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 MRPL32Q9BYC8 188 aaKnown RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM106BQ9NUM4 274 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 RAXQ9Y2V3 346 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 ANKRD11Q6UB99 2663 aaPredicted RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 FASNP49327 2511 aaKnown RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 ACACAQ13085 2346 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 URB1O60287 2271 aaKnown RBP4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 NBEAQ8NFP9 2946 aa4.21□□□□□ -1.74
ATPAF1-212ENST00000542495 SMIM27A0A1W2PRY6 76 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 GRIFINA4D1Z8 144 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 CGB1A6NKQ9 187 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 H0YJW9 148 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 TNFRSF13BO14836 293 aaPredicted RBP4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 FCN3O75636 299 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 ACTL6BO94805 426 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 MT-ND6P03923 174 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 FRMD6-AS1P0C7T7 363 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 RNF224P0DH78 156 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 C8orf88P0DMB2 117 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 CRISP2P16562 243 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 NDUFB7P17568 137 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 PPOXP50336 477 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 TPPP2P59282 170 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 RANP62826 216 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 OR5I1Q13606 314 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 MLANAQ16655 118 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 COX19Q49B96 90 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 TPTE2P1Q5T6R2 138 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 PVRIGQ6DKI7 326 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 TEX43Q6ZNM6 134 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM136Q6ZRR5 245 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 LINC00311Q8N616 119 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 ST6GALNAC3Q8NDV1 305 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 DEFB108BQ8NET1 73 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 OR4A5Q8NH83 315 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 OR9G1Q8NH87 305 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 TMEM167AQ8TBQ9 72 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 RNF2Q99496 336 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 C20orf144Q9BQM9 153 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 HINT2Q9BX68 163 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 SLC25A2Q9BXI2 301 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 MRPL20Q9BYC9 149 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 GAL3ST2Q9H3Q3 398 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 DCAF16Q9NXF7 216 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNRD1Q9P1U0 126 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 CELSR3Q9NYQ7 3312 aa4.2□□□□□ -1.74
ATPAF1-212ENST00000542495 NKX6-3A6NJ46 265 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 C17orf100A8MU93 164 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 FCN1O00602 326 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 SERF1AO75920 110 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 FSTL3O95633 263 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 SCGB1D1O95968 90 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 CRYABP02511 175 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 APOA2P02652 100 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 IRF2P14316 349 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 RAB4AP20338 218 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 USF1P22415 310 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 GATA2P23769 480 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 IER3P46695 156 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 COMPP49747 757 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 ZNF137PP52743 207 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 RPL8P62917 257 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 FAM27E3Q08E93 113 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 ADIPOQQ15848 244 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 TIGITQ495A1 244 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 OR10J3Q5JRS4 329 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 WDR73Q6P4I2 378 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 MRPL52Q86TS9 123 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 OR8I2Q8N0Y5 310 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 RBMXL3Q8N7X1 1067 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 THAP8Q8NA92 274 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 OR10W1Q8NGF6 305 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 FAM57AQ8TBR7 257 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 ST6GALNAC6Q969X2 333 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 SNHG12Q9BXW3 62 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 DNAJC4Q9NNZ3 241 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 CDC42EP3Q9UKI2 254 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 DYSFO75923 2080 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 IGKV1D-37A0A075B6S9 117 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 A0A1W2PN81 502 aa4.19□□□□□ -1.74
ATPAF1-212ENST00000542495 SNURFLB1AK76 121 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms