RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 AURKAIP1Q9NWT8 199 aaPredicted RBP13.8□□□□□ -0.2
PCDHB17P-201ENST00000539533 H0YJW9 148 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 RBP4P02753 201 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 ATP5G3P48201 142 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 ZNF137PP52743 207 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 GAGE1Q13065 139 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 OR4A47Q6IF82 309 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 OR5AN1Q8NGI8 311 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 TBX15Q96SF7 602 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 CLEC7AQ9BXN2 247 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 A0A1B0GUS0 222 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 UBE2G2P60604 165 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 GCSAMLQ5JQS6 135 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 TMEM144Q7Z5S9 345 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 MS4A10Q96PG2 267 aa13.79□□□□□ -0.2
PCDHB17P-201ENST00000539533 A0A0U1RQK1 487 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 ZNF320A2RRD8 509 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 FAM90A9PA6NNJ1 464 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 PRRX1P54821 245 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 HLA-DRB5Q30154 266 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 CST9LP1Q5W188 147 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 TMEM256Q8N2U0 113 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 PNKDQ8N490 385 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 DERL1Q9BUN8 251 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 WDR83OSQ9Y284 106 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 TRAPPC1Q9Y5R8 145 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 NDUFB4O95168 129 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 FAM71F2Q6NXP2 309 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 NRGNQ92686 78 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 TNFRSF14Q92956 283 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 KCNIP2Q9NS61 270 aa13.78□□□□□ -0.2
PCDHB17P-201ENST00000539533 CSMD2Q7Z408 3487 aa13.77□□□□□ -0.2
PCDHB17P-201ENST00000539533 APOA2P02652 100 aa13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 LINC00614P0C842 121 aa13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 CD1BP29016 333 aa13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 TMEM249Q2WGJ8 235 aa13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 AARDQ4LEZ3 155 aa13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 ARSJQ5FYB0 599 aaPredicted RBP13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 BTF3L4Q96K17 158 aa13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 IMMP2LQ96T52 175 aa13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 TET2Q6N021 2002 aaPredicted RBP13.77□□□□□ -0.21
PCDHB17P-201ENST00000539533 BUB1B-PAK6H3BSN5 160 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 NUPR1O60356 82 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 POU2AF1Q16633 256 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 ZNF114Q8NC26 417 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 PXMP4Q9Y6I8 212 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 CENPEQ02224 2701 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 IGHV3-72A0A0B4J1Y9 119 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 F6UZH7 168 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 MYOD1P15172 320 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 LMO4P61968 165 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 FOXL1Q12952 345 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 OR4P4Q8NGL7 312 aa13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 MAP1AP78559 2803 aaPredicted RBP13.76□□□□□ -0.21
PCDHB17P-201ENST00000539533 A0A1W2PPV4 95 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 PGPEP1LA6NFU8 196 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 COX6B1P14854 86 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 FLYWCH2Q96CP2 140 aaKnown RBP13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 LPAR2Q9HBW0 351 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 CELSR2Q9HCU4 2923 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 C15orf61A6NNL5 157 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 IL6RP08887 468 aaPredicted RBP13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 KLRD1Q13241 179 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 LDLRAD2Q5SZI1 272 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 TOMM20LQ6UXN7 152 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 MRPL52Q86TS9 123 aaKnown RBP13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 OSR1Q8TAX0 266 aaPredicted RBP13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 SFRP2Q96HF1 295 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 HARBI1Q96MB7 349 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 FBN2P35556 2912 aa13.75□□□□□ -0.21
PCDHB17P-201ENST00000539533 M0R1W7 72 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 SAA1P0DJI8 122 aaPredicted RBP13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 BATFQ16520 125 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 TMEM177Q53S58 311 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 SGMS2Q8NHU3 365 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 RITA1Q96K30 269 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 CD33P20138 364 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 COL8A1P27658 744 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 BRS3P32247 399 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 ATP5J2P56134 94 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 DMRTA1Q5VZB9 504 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 TMEM14BQ9NUH8 114 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 WASHC3Q9Y3C0 194 aa13.74□□□□□ -0.21
PCDHB17P-201ENST00000539533 WNK2Q9Y3S1 2297 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 TNCP24821 2201 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 TRBV20OR9-2A0A075B6H5 130 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 PRTN3P24158 256 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 PAX2Q02962 417 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 HCP5Q6MZN7 132 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 PDPNQ86YL7 162 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 OR4C13Q8NGP0 309 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 MIEN1Q9BRT3 115 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 TCF19Q9Y242 345 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 INSIG2Q9Y5U4 225 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 MDFIC2A0A1B0GVS7 189 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 UPK2O00526 184 aa13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 ENSAO43768 121 aaKnown RBP13.73□□□□□ -0.21
PCDHB17P-201ENST00000539533 TDRG1Q3Y452 100 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms