RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 GSN-AS1Q9NRJ2 163 aa14.4□□□□□ -0.1
GNE-204ENST00000539208 IGKV1D-37A0A075B6S9 117 aa14.4□□□□□ -0.1
GNE-204ENST00000539208 CRYGCP07315 174 aa14.4□□□□□ -0.1
GNE-204ENST00000539208 CDSNQ15517 529 aa14.4□□□□□ -0.1
GNE-204ENST00000539208 SGMS2Q8NHU3 365 aa14.4□□□□□ -0.1
GNE-204ENST00000539208 EAF1Q96JC9 268 aaPredicted RBP14.4□□□□□ -0.1
GNE-204ENST00000539208 SIGLEC9Q9Y336 463 aa14.4□□□□□ -0.1
GNE-204ENST00000539208 K7EN84 100 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 FABP1P07148 127 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 RPL27AP46776 148 aaKnown RBP14.39□□□□□ -0.11
GNE-204ENST00000539208 SSBP2P81877 361 aaPredicted RBP14.39□□□□□ -0.11
GNE-204ENST00000539208 RNF5Q99942 180 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 SLC25A2Q9BXI2 301 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 TRAV9-1A0A075B6T8 112 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 HELTA6NFD8 242 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 LY6LH3BQJ8 138 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 COMPP49747 757 aaPredicted RBP14.39□□□□□ -0.11
GNE-204ENST00000539208 RPL15P61313 204 aaKnown RBP14.39□□□□□ -0.11
GNE-204ENST00000539208 PAX2Q02962 417 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 PYY3Q5JQD4 70 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 OR10D4PQ8NGN7 298 aa14.39□□□□□ -0.11
GNE-204ENST00000539208 LIPFP07098 398 aa14.38□□□□□ -0.11
GNE-204ENST00000539208 PDLIM4P50479 330 aa14.38□□□□□ -0.11
GNE-204ENST00000539208 CBLN4Q9NTU7 201 aa14.38□□□□□ -0.11
GNE-204ENST00000539208 A0A0U1RQK1 487 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 ZNF320A2RRD8 509 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 GGTLC3B5MD39 225 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 COX7A2P2O60397 106 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 CRYBB3P26998 211 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 BPIFB3P59826 476 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 DNLZQ5SXM8 178 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 C10orf113Q5VZT2 155 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 OR1P1Q8NH06 330 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 OR10J4P0C629 311 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 DLX1P56177 255 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 TNXAQ16473 311 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 PDZD11Q5EBL8 140 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 PATE2Q6UY27 113 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 PPP1R27Q86WC6 154 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 RPEQ96AT9 228 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 IL36BQ9NZH7 164 aa14.37□□□□□ -0.11
GNE-204ENST00000539208 MRPL36Q9P0J6 103 aaKnown RBP14.37□□□□□ -0.11
GNE-204ENST00000539208 CORTO00230 105 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 REG1AP05451 166 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 CNTFRP26992 372 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 GNG4P50150 75 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 ZNF90Q03938 601 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 MORN5Q5VZ52 161 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 C11orf71Q6IPW1 123 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 HIST1H2BLQ99880 126 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 XKRY2A2RUG3 117 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 FABP4P15090 132 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 HNF1AP20823 631 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 MFAP2P55001 183 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 SUMO1P63165 101 aaKnown RBP14.36□□□□□ -0.11
GNE-204ENST00000539208 TMEM116Q8NCL8 245 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 OR5AU1Q8NGC0 362 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 TIMD4Q96H15 378 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 TRGV9Q99603 122 aa14.36□□□□□ -0.11
GNE-204ENST00000539208 TRAV5A0A0B4J249 113 aa14.35□□□□□ -0.11
GNE-204ENST00000539208 COX7A1P24310 79 aa14.35□□□□□ -0.11
GNE-204ENST00000539208 CENPWQ5EE01 88 aa14.35□□□□□ -0.11
GNE-204ENST00000539208 NEU4Q8WWR8 484 aaPredicted RBP14.35□□□□□ -0.11
GNE-204ENST00000539208 ZNF355PQ9NSJ1 428 aa14.35□□□□□ -0.11
GNE-204ENST00000539208 YPEL3P61236 119 aaPredicted RBP14.34□□□□□ -0.11
GNE-204ENST00000539208 UBE2L3P68036 154 aaKnown RBP14.34□□□□□ -0.11
GNE-204ENST00000539208 CTAG1AP78358 180 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 HCP5Q6MZN7 132 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 TEX22C9J3V5 150 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 C22orf46C9J442 243 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 OR11H6Q8NGC7 330 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 C22orf15Q8WYQ4 148 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 MISP3Q96FF7 219 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 PACRGQ96M98 296 aaPredicted RBP14.34□□□□□ -0.11
GNE-204ENST00000539208 PAXXQ9BUH6 204 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 TNFRSF19Q9NS68 423 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 ONECUT1Q9UBC0 465 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 TRAPPC1Q9Y5R8 145 aa14.34□□□□□ -0.11
GNE-204ENST00000539208 MALRD1Q5VYJ5 2156 aa14.33□□□□□ -0.11
GNE-204ENST00000539208 IGHV3-48P01763 117 aa14.33□□□□□ -0.11
GNE-204ENST00000539208 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.11
GNE-204ENST00000539208 TIGITQ495A1 244 aa14.33□□□□□ -0.11
GNE-204ENST00000539208 SRSF8Q9BRL6 282 aaKnown RBP14.33□□□□□ -0.11
GNE-204ENST00000539208 F11RQ9Y624 299 aaKnown RBP14.33□□□□□ -0.11
GNE-204ENST00000539208 ANKHD1Q8IWZ3 2542 aaKnown RBP14.33□□□□□ -0.12
GNE-204ENST00000539208 GCGP01275 180 aa14.33□□□□□ -0.12
GNE-204ENST00000539208 STXBP6Q8NFX7 210 aa14.33□□□□□ -0.12
GNE-204ENST00000539208 OSTCQ9NRP0 149 aa14.33□□□□□ -0.12
GNE-204ENST00000539208 DMRT1Q9Y5R6 373 aa14.33□□□□□ -0.12
GNE-204ENST00000539208 V9GYV3 84 aa14.33□□□□□ -0.12
GNE-204ENST00000539208 M0R1W7 72 aa14.32□□□□□ -0.12
GNE-204ENST00000539208 CNN1P51911 297 aaKnown RBP14.32□□□□□ -0.12
GNE-204ENST00000539208 TAS2R60P59551 318 aa14.32□□□□□ -0.12
GNE-204ENST00000539208 ERVFC1-1P60608 527 aa14.32□□□□□ -0.12
GNE-204ENST00000539208 TPTE2P1Q5T6R2 138 aa14.32□□□□□ -0.12
GNE-204ENST00000539208 IGF2BP2-AS1Q96M15 143 aa14.32□□□□□ -0.12
GNE-204ENST00000539208 PERPQ96FX8 193 aa14.32□□□□□ -0.12
GNE-204ENST00000539208 SLC17A3O00476 420 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 IGLV2-8P01709 118 aa14.31□□□□□ -0.12
GNE-204ENST00000539208 HTR1DP28221 377 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms