RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 RTL1A6NKG5 1358 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 STRCQ7RTU9 1775 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 DOCK5Q9H7D0 1870 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 F8W036 122 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 CTSDP07339 412 aaPredicted RBP1.42□□□□□ -2.18
PRKDC-205ENST00000535375 HTR1AP08908 422 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 COX6A1P12074 109 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 AKR1C3P42330 323 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 EIF2B2P49770 351 aaKnown RBP1.42□□□□□ -2.18
PRKDC-205ENST00000535375 TMED2Q15363 201 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 LINC01554Q52M75 96 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 ZNF826PQ6ZT77 177 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 BPIFA4PQ86YQ2 179 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 KRT222Q8N1A0 295 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 ZNF563Q8TA94 476 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 Q96M85 177 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 KIFC1Q9BW19 673 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 CKLFQ9UBR5 152 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 ERGIC3Q9Y282 383 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 ARL5AQ9Y689 179 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 GLI3P10071 1580 aa1.42□□□□□ -2.18
PRKDC-205ENST00000535375 TRANK1O15050 2925 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 CAMSAP1Q5T5Y3 1602 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 TRGV2A0A075B6R0 118 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 SDCBPO00560 298 aaPredicted RBP1.41□□□□□ -2.18
PRKDC-205ENST00000535375 PMP2P02689 132 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 DHRS4L2Q6PKH6 230 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 LCA10Q71F78 164 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 S100A7AQ86SG5 101 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 CLVS1Q8IUQ0 354 aaPredicted RBP1.41□□□□□ -2.18
PRKDC-205ENST00000535375 SIGLECL1Q8N7X8 197 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 PXT1Q8NFP0 134 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 YIPF3Q9GZM5 350 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 TMEM133Q9H2Q1 129 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 MIXL1Q9H2W2 232 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 CST9LQ9H4G1 147 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 SLC39A9Q9NUM3 307 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 ARMC1Q9NVT9 282 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 TVP23BQ9NYZ1 205 aa1.41□□□□□ -2.18
PRKDC-205ENST00000535375 KIF13BQ9NQT8 1826 aa1.4□□□□□ -2.18
PRKDC-205ENST00000535375 TRAV4A0A0B4J268 109 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 A0A0D9SG52 128 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 C1QBP02746 253 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 ELOBQ15370 118 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 TAF1AQ15573 450 aaPredicted RBP1.4□□□□□ -2.19
PRKDC-205ENST00000535375 FP248Q71RG6 208 aaPredicted RBP1.4□□□□□ -2.19
PRKDC-205ENST00000535375 HIST3H2BBQ8N257 126 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 C10orf126Q8N4M7 172 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 DEFB119Q8N690 84 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 CDC26Q8NHZ8 85 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 SLC25A40Q8TBP6 338 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 GNPDA2Q8TDQ7 276 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 ADAT3Q96EY9 351 aaPredicted RBP1.4□□□□□ -2.19
PRKDC-205ENST00000535375 CYSTM1Q9H1C7 97 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 RIC1Q4ADV7 1423 aa1.4□□□□□ -2.19
PRKDC-205ENST00000535375 TCL1BO95988 128 aa1.39□□□□□ -2.19
PRKDC-205ENST00000535375 SMIM17P0DL12 118 aa1.39□□□□□ -2.19
PRKDC-205ENST00000535375 CRYGAP11844 174 aa1.39□□□□□ -2.19
PRKDC-205ENST00000535375 CASP1P29466 404 aa1.39□□□□□ -2.19
PRKDC-205ENST00000535375 HSPE1P61604 102 aaKnown RBP1.39□□□□□ -2.19
PRKDC-205ENST00000535375 BASP1P80723 227 aaKnown RBP1.39□□□□□ -2.19
PRKDC-205ENST00000535375 ZNF846Q147U1 533 aa1.39□□□□□ -2.19
PRKDC-205ENST00000535375 C9orf16Q9BUW7 83 aa1.39□□□□□ -2.19
PRKDC-205ENST00000535375 COL4A1P02462 1669 aa1.39□□□□□ -2.19
PRKDC-205ENST00000535375 EIF3AQ14152 1382 aaKnown RBP1.38□□□□□ -2.19
PRKDC-205ENST00000535375 TRBV19A0A075B6N1 114 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 IGKV1-9A0A0C4DH69 117 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 TRBV6-5A0A0K0K1A5 114 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 RPSAP08865 295 aaKnown RBP1.38□□□□□ -2.19
PRKDC-205ENST00000535375 SRIP30626 198 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 YPEL3P61236 119 aaPredicted RBP1.38□□□□□ -2.19
PRKDC-205ENST00000535375 GOLT1AQ6ZVE7 132 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 AAED1Q7RTV5 226 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 TRAPPC6BQ86SZ2 158 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 OR4D11Q8NGI4 311 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 OR5A1Q8NGJ0 315 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 DNAJC9Q8WXX5 260 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 GPR146Q96CH1 333 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 ENY2Q9NPA8 101 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 OSTCQ9NRP0 149 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 IL20Q9NYY1 176 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 OPTCQ9UBM4 332 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 FAM32AQ9Y421 112 aaKnown RBP1.38□□□□□ -2.19
PRKDC-205ENST00000535375 CR1P17927 2039 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 HEATR5AQ86XA9 2040 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 CCDC88CQ9P219 2028 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 SETD5Q9C0A6 1442 aa1.38□□□□□ -2.19
PRKDC-205ENST00000535375 PRRC2BQ5JSZ5 2229 aaKnown RBP1.38□□□□□ -2.19
PRKDC-205ENST00000535375 IGKV1D-42A0A075B6H8 117 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 J3QRK9 145 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 CRPP02741 224 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 S100A4P26447 101 aaKnown RBP1.37□□□□□ -2.19
PRKDC-205ENST00000535375 FKBP2P26885 142 aaKnown RBP1.37□□□□□ -2.19
PRKDC-205ENST00000535375 ERP29P30040 261 aaKnown RBP1.37□□□□□ -2.19
PRKDC-205ENST00000535375 SERPINB9P50453 376 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 RHEBQ15382 184 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 WFDC11Q8NEX6 87 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 WFDC5Q8TCV5 224 aa1.37□□□□□ -2.19
PRKDC-205ENST00000535375 NAA38Q9BRA0 125 aaKnown RBP1.37□□□□□ -2.19
PRKDC-205ENST00000535375 GINS4Q9BRT9 223 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms