RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 GCSAMLQ5JQS6 135 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 DEPPQ9NTK1 212 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 LY6EQ16553 131 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 LINC01551Q86U37 167 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 JKAMPQ9P055 326 aa12.87□□□□□ -0.35
PCDHA4-203ENST00000530339 H3BUT2 72 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 STAG3L3P0CL85 134 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 FAM159AQ6UWV7 190 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 E9PQ18 207 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 DLEU1O43261 78 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 FAM216BQ8N7L0 139 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 RNASE6Q93091 150 aaKnown RBP12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 LINC00614P0C842 121 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 MORN2Q502X0 79 aa12.86□□□□□ -0.35
PCDHA4-203ENST00000530339 EFNA2O43921 213 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 PAX1P15863 534 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 ARPC1AQ92747 370 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 FOXC2Q99958 501 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 AGMATQ9BSE5 352 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 MRPL20Q9BYC9 149 aaKnown RBP12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 NDUFS6O75380 124 aaKnown RBP12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 SEMA5BQ9P283 1151 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 EPDR1Q9UM22 224 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 GVINP1Q7Z2Y8 2422 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 SAA1P0DJI8 122 aaPredicted RBP12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 CFPP27918 469 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 DUTP33316 252 aaKnown RBP12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 SAA2-SAA4A0A096LPE2 208 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 SAA2P0DJI9 122 aaPredicted RBP12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 ZIC4Q8N9L1 334 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
PCDHA4-203ENST00000530339 BSPH1Q075Z2 132 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 FAM27E3Q08E93 113 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 MST1LQ2TV78 715 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 ACTL10Q5JWF8 245 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 FAM201AQ5SY85 155 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 TMEM105Q8N8V8 129 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 C9orf106Q8NAJ2 232 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 DPH3Q96FX2 82 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 ST20Q9HBF5 79 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 A6NNC1 897 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 ASIPP42127 132 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 TREML4Q6UXN2 200 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 SLC50A1Q9BRV3 221 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 FBXL15Q9H469 300 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 OR9G9P0C7N8 305 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 CD69Q07108 199 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 DERL1Q9BUN8 251 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 FBXL7Q9UJT9 491 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 MOB4Q9Y3A3 225 aa12.84□□□□□ -0.35
PCDHA4-203ENST00000530339 CELA3BP08861 270 aa12.83□□□□□ -0.35
PCDHA4-203ENST00000530339 TMEM14EPQ6UXP3 125 aa12.83□□□□□ -0.35
PCDHA4-203ENST00000530339 PPP1R27Q86WC6 154 aa12.83□□□□□ -0.35
PCDHA4-203ENST00000530339 CHCHD1Q96BP2 118 aaKnown RBP12.83□□□□□ -0.35
PCDHA4-203ENST00000530339 DOCK6Q96HP0 2047 aa12.83□□□□□ -0.35
PCDHA4-203ENST00000530339 IGHV3-35A0A0C4DH35 117 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 GNG5P63218 68 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 PRSS8Q16651 343 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 TSKUQ8WUA8 353 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 GGTLC1Q9BX51 225 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 RFNGQ9Y644 331 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 TRPM7Q96QT4 1865 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 C9JCJ5 164 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 LDLRAD2Q5SZI1 272 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 FOXA2Q9Y261 457 aaPredicted RBP12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 TRGV3P03979 118 aa12.83□□□□□ -0.36
PCDHA4-203ENST00000530339 IGHV3OR16-12A0A075B7B8 117 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 HGFACQ04756 655 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 FGFBP3Q8TAT2 258 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 MPDZO75970 2070 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 IL18BPO95998 194 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 TMEM170BQ5T4T1 132 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 Q6ZS49 121 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 TMEM256Q8N2U0 113 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 ASCL2Q99929 193 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 ARHGEF17Q96PE2 2063 aaPredicted RBP12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 MUC21A0A0G2JKD1 596 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 MUC21A0A140T8X8 626 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 TCRBV4S1A1TA0A5B7 111 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 NBR2O15453 112 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 TGFAP01135 160 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 PYYP10082 97 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 DSCR9P59020 149 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 MUC21Q5SSG8 566 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 PNRC2Q9NPJ4 139 aaKnown RBP12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 IGKV1D-33P01593 117 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 IGKV1-33P01594 117 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 KLHDC3Q9BQ90 382 aa12.82□□□□□ -0.36
PCDHA4-203ENST00000530339 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
PCDHA4-203ENST00000530339 EMP1P54849 157 aa12.81□□□□□ -0.36
PCDHA4-203ENST00000530339 MRPL52Q86TS9 123 aaKnown RBP12.81□□□□□ -0.36
PCDHA4-203ENST00000530339 TMEM133Q9H2Q1 129 aa12.81□□□□□ -0.36
PCDHA4-203ENST00000530339 HBDP02042 147 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms