RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 MCFD2Q8NI22 146 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 TMEM170AQ8WVE7 144 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 SSMEM1Q8WWF3 244 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 SLC25A46Q96AG3 418 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 GALMQ96C23 342 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 ATG5Q9H1Y0 275 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 TAF9BQ9HBM6 251 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 SPANXA1Q9NS26 97 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 KCNIP1Q9NZI2 227 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 DPM3Q9P2X0 92 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 FOXA2Q9Y261 457 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 LSM4Q9Y4Z0 139 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 ETV7Q9Y603 341 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 RFNGQ9Y644 331 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 V9GYY9 64 aa5.04□□□□□ -1.6
ATPAF1-209ENST00000529214 KIR2DL5BA0A0G2JN68 375 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 KIR2DL5BA0A0G2JPC4 375 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 A0A1B0GUS0 222 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 SDCBPO00560 298 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 MFNGO00587 321 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 SCGNO76038 276 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 MPC2O95563 127 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 IGHV3-7P01780 117 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 OR13C7P0DN81 318 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 HIST1H1DP16402 221 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 GNB3P16520 340 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 AZU1P20160 251 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 EIF5AP63241 154 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 JOSD1Q15040 202 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 HMGN3Q15651 99 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 TMEM241Q24JQ0 296 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 HLA-DRB5Q30154 266 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 TMEM30BQ3MIR4 351 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 MORN2Q502X0 79 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 FAM53AQ6NSI3 398 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 KIR2DL5AQ8N109 375 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 LINC00311Q8N616 119 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 C8orf31Q8N9H6 132 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 OR1L1Q8NH94 360 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 KIR2DL5BQ8NHK3 375 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 UBALD1Q8TB05 177 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 PIFOQ8TCI5 191 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 LEAP2Q969E1 77 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 FLYWCH2Q96CP2 140 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 OR10C1Q96KK4 312 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 P2RX4Q99571 388 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 HDHD3Q9BSH5 251 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 CHIAQ9BZP6 476 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 ACTR3CQ9C0K3 210 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 TNFSF18Q9UNG2 199 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 HILPDAQ9Y5L2 63 aa5.03□□□□□ -1.6
ATPAF1-209ENST00000529214 IGHV3-43A0A0B4J1X8 118 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 G3V4G9 280 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 YPEL1O60688 119 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 MBPP02686 304 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 CD74P04233 296 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 IGHV3-43DP0DP04 118 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 HIST1H1EP10412 219 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 NPBWR1P48145 328 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 DYNLT3P51808 116 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 SRSF4Q08170 494 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 RHEBQ15382 184 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 LRRC75BQ2VPJ9 315 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 ZNF260Q3ZCT1 412 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 CD300EQ496F6 205 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 CT45A1Q5HYN5 189 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 LY6G6FQ5SQ64 297 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 MOB1BQ7L9L4 216 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 SLC35E3Q7Z769 313 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 INO80EQ8NBZ0 244 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 ZNF439Q8NDP4 499 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 CT45A3Q8NHU0 189 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 ISOC2Q96AB3 205 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 SLC25A38Q96DW6 304 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 SLC35E1Q96K37 410 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 YPEL2Q96QA6 119 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 C19orf24Q9BVV8 132 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 ARL6Q9H0F7 186 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 BEX1Q9HBH7 125 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 TNFRSF19Q9NS68 423 aa5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 CARHSP1Q9Y2V2 147 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-209ENST00000529214 TRAV18A0A075B6X5 111 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 IFITM10A6NMD0 228 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 ZNF705EA8MWA4 302 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 OOSP1A8MZH6 123 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 H3BUX3 64 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 FABP7O15540 132 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 RBFOX2O43251 390 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 XRCC3O43542 346 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 CFDP00746 253 aaPredicted RBP5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 SCTP09683 121 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 RFX2P48378 723 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 ARFRP1Q13795 201 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 C10orf91Q5T1B1 145 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 SLC25A48Q6ZT89 311 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 HAPLN4Q86UW8 402 aa5.01□□□□□ -1.61
ATPAF1-209ENST00000529214 NIT1Q86X76 327 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms