RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PRSS54Q6PEW0 395 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 HAPLN4Q86UW8 402 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 THAP6Q8TBB0 222 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 ZNF502Q8TBZ5 544 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 RNASEH2CQ8TDP1 164 aaKnown RBP10.6□□□□□ -0.71
CD44-224ENST00000526669 LYRM2Q9NU23 88 aaPredicted RBP10.6□□□□□ -0.71
CD44-224ENST00000526669 C21orf62Q9NYP8 219 aa10.6□□□□□ -0.71
CD44-224ENST00000526669 OR2T8A6NH00 312 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 PMS2P5A8MQ11 134 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 G3V3Q6 166 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 LY86O95711 162 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 PET100P0DJ07 73 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 CD69Q07108 199 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 KRTAP21-3Q3LHN1 58 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 ZNF343Q6P1L6 599 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 SLC16A13Q7RTY0 426 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 VN1R17PQ8TDU5 208 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 BSCL2Q96G97 398 aaPredicted RBP10.59□□□□□ -0.71
CD44-224ENST00000526669 ACY3Q96HD9 319 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 RAX2Q96IS3 184 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 CXorf58Q96LI9 332 aa10.59□□□□□ -0.71
CD44-224ENST00000526669 VWFP04275 2813 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
CD44-224ENST00000526669 RPS10-NUDT3A0A1W2PQS6 291 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 SMCO3A2RU48 225 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 PRSS46E5RG02 174 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 F8W735 103 aaPredicted RBP10.58□□□□□ -0.72
CD44-224ENST00000526669 P2RY1P47900 373 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 RND2P52198 227 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 MFAP4P55083 255 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 ATP5IP56385 69 aaPredicted RBP10.58□□□□□ -0.72
CD44-224ENST00000526669 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 TMEM252Q8N6L7 170 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 TMEM217Q8N7C4 229 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 ASB13Q8WXK3 278 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 ST6GAL2Q96JF0 529 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 SLC35E1Q96K37 410 aa10.58□□□□□ -0.72
CD44-224ENST00000526669 PEF1Q9UBV8 284 aaKnown RBP10.58□□□□□ -0.72
CD44-224ENST00000526669 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 IGHV3-35A0A0C4DH35 117 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 BMPR1BO00238 502 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 TSPAN15O95858 294 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 LYL1P12980 280 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 ARL3P36405 182 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 SLURP1P55000 103 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
CD44-224ENST00000526669 NHLH2Q02577 135 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 SLC38A11Q08AI6 406 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 OR10P1Q8NGE3 313 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 OR1N2Q8NGR9 330 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 DPF1Q92782 380 aa10.57□□□□□ -0.72
CD44-224ENST00000526669 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 LINC01619G3V211 115 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 CCL24O00175 119 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 TGOLN2O43493 480 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 GNG7O60262 68 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 PF4P02776 101 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 HSPB1P04792 205 aaKnown RBP10.56□□□□□ -0.72
CD44-224ENST00000526669 CLEC3BP05452 202 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 SULT1A1P50225 295 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 RUNX1Q01196 453 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 AKR1C1Q04828 323 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 CD300CQ08708 224 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 FGL1Q08830 312 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 GAMTQ14353 236 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 ETFRF1Q6IPR1 90 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 AKAP14Q86UN6 197 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 STX12Q86Y82 276 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 NPIPB3Q92617 1050 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 CHRDL1Q9BU40 450 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 SLC25A31Q9H0C2 315 aa10.56□□□□□ -0.72
CD44-224ENST00000526669 SLC25A4P12235 298 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 RPL12P30050 165 aaKnown RBP10.55□□□□□ -0.72
CD44-224ENST00000526669 GPX4P36969 197 aaPredicted RBP10.55□□□□□ -0.72
CD44-224ENST00000526669 NPBWR1P48145 328 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 DLK1P80370 383 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 ZNF616Q08AN1 781 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 TIGITQ495A1 244 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 LILRB2Q8N423 598 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 OR4X1Q8NH49 305 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 SMIM3Q9BZL3 60 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
CD44-224ENST00000526669 M0QZ24 198 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 CLN5O75503 358 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 OR2C1O95371 312 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
CD44-224ENST00000526669 ADMP35318 185 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 CLINT1Q14677 625 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 RPEL1Q2QD12 228 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 OR4F17Q8NGA8 305 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 OR1S2Q8NGQ3 325 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 OR4F4Q96R69 305 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 TXN2Q99757 166 aa10.54□□□□□ -0.72
CD44-224ENST00000526669 IGHV3OR16-8A0A075B7F1 116 aa10.53□□□□□ -0.72
CD44-224ENST00000526669 UBE2L5PA0A1B0GUS4 154 aa10.53□□□□□ -0.72
CD44-224ENST00000526669 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms