RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 SULT1A3P0DMM9 295 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 SULT1A4P0DMN0 295 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 NPBWR1P48145 328 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 TMED4Q7Z7H5 227 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 OR10C1Q96KK4 312 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 SPATA25Q9BR10 227 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 HEYLQ9NQ87 328 aaPredicted RBP12.71□□□□□ -0.37
CCS-203ENST00000526058 SMPXQ9UHP9 88 aa12.71□□□□□ -0.37
CCS-203ENST00000526058 A0A0B4J2A0 478 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 IGHV7-4-1A0A0J9YVY3 117 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 CORTO00230 105 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 TSPAN4O14817 238 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 OPRK1P41145 380 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 ANKRD55Q3KP44 614 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 LAMTOR1Q6IAA8 161 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 RETNQ9HD89 108 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 SHPKQ9UHJ6 478 aa12.7□□□□□ -0.38
CCS-203ENST00000526058 IGHV3OR16-13A0A075B7E8 117 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 IGHV3-74A0A0B4J1X5 117 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 ANXA3P12429 323 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 HTR2BP41595 481 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 BAK1Q16611 211 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 TMEM128Q5BJH2 165 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 LGI3Q8N145 548 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 TMEM116Q8NCL8 245 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 TMEM170AQ8WVE7 144 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 CITED4Q96RK1 184 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 RNF2Q99496 336 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 SPAG8Q99932 426 aaPredicted RBP12.69□□□□□ -0.38
CCS-203ENST00000526058 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 HIPK2Q9H2X6 1198 aa12.69□□□□□ -0.38
CCS-203ENST00000526058 TRAV14DV4A0A0A6YYC5 116 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 A0A1B0GU03 582 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 CHEK1O14757 476 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 CLN5O75503 358 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 CCR6P51684 374 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 C2orf83Q53S99 150 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 OR4X1Q8NH49 305 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 DEDD2Q8WXF8 326 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 SLC25A21Q9BQT8 299 aaPredicted RBP12.68□□□□□ -0.38
CCS-203ENST00000526058 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 UBQLN2Q9UHD9 624 aa12.68□□□□□ -0.38
CCS-203ENST00000526058 PUS1Q9Y606 427 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCS-203ENST00000526058 RYR3Q15413 4870 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 APOHP02749 345 aaPredicted RBP12.67□□□□□ -0.38
CCS-203ENST00000526058 SRPXP78539 464 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 SMCO1Q147U7 214 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 ZNF600Q6ZNG1 722 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 SLC24A4Q8NFF2 622 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 MUC7Q8TAX7 377 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 SDHCQ99643 169 aaPredicted RBP12.67□□□□□ -0.38
CCS-203ENST00000526058 FAM110AQ9BQ89 295 aa12.67□□□□□ -0.38
CCS-203ENST00000526058 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
CCS-203ENST00000526058 VAMP1P23763 118 aa12.66□□□□□ -0.38
CCS-203ENST00000526058 GINS3Q9BRX5 216 aa12.66□□□□□ -0.38
CCS-203ENST00000526058 RBKSQ9H477 322 aa12.66□□□□□ -0.38
CCS-203ENST00000526058 EDA2RQ9HAV5 297 aa12.66□□□□□ -0.38
CCS-203ENST00000526058 HSPB7Q9UBY9 170 aa12.66□□□□□ -0.38
CCS-203ENST00000526058 STARD9Q9P2P6 4700 aa12.66□□□□□ -0.38
CCS-203ENST00000526058 TENM2Q9NT68 2774 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 IGKV3-7A0A075B6H7 116 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 IGHV3-66A0A0C4DH42 116 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 PPP1R1AQ13522 171 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 ODF3L2Q3SX64 289 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 TIGITQ495A1 244 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 TRIQKQ629K1 86 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 FAM90A2PQ658T7 463 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 LILRB2Q8N423 598 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 OR1S1Q8NH92 325 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 RNASEH2CQ8TDP1 164 aaKnown RBP12.65□□□□□ -0.38
CCS-203ENST00000526058 ST8SIA2Q92186 375 aa12.65□□□□□ -0.38
CCS-203ENST00000526058 DYNC2H1Q8NCM8 4307 aaKnown RBP12.65□□□□□ -0.38
CCS-203ENST00000526058 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
CCS-203ENST00000526058 LINC00854A0A1B0GVQ3 168 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 RPS10-NUDT3A0A1W2PQS6 291 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 OR4C46A6NHA9 309 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 SFT2D2O95562 160 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 IGKV1-17P01599 117 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 NPY1RP25929 384 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 TFPI2P48307 235 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 INPP1P49441 399 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 RBMS2Q15434 407 aaKnown RBP12.64□□□□□ -0.39
CCS-203ENST00000526058 CENPSQ8N2Z9 138 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 LRTM2Q8N967 370 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 DTD1Q8TEA8 209 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 GGTLC1Q9BX51 225 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 VSIRQ9H7M9 311 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
CCS-203ENST00000526058 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
CCS-203ENST00000526058 PITX3O75364 302 aa12.63□□□□□ -0.39
CCS-203ENST00000526058 IFNA10P01566 189 aa12.63□□□□□ -0.39
CCS-203ENST00000526058 RND2P52198 227 aa12.63□□□□□ -0.39
CCS-203ENST00000526058 CASC10Q5T4H9 136 aa12.63□□□□□ -0.39
CCS-203ENST00000526058 TCF24Q7RTU0 167 aa12.63□□□□□ -0.39
CCS-203ENST00000526058 GBGT1Q8N5D6 347 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms