RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 APH1BQ8WW43 257 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 OR10C1Q96KK4 312 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 C17orf77Q96MU5 243 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 CMSS1Q9BQ75 279 aaKnown RBP4.4□□□□□ -1.71
VPS13B-211ENST00000522802 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 PECRQ9BY49 303 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 C21orf62Q9NYP8 219 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 RABAC1Q9UI14 185 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 RBM7Q9Y580 266 aaKnown RBP4.4□□□□□ -1.71
VPS13B-211ENST00000522802 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.71
VPS13B-211ENST00000522802 IGKV1D-8A0A087WSZ0 117 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 TRAV3A0A0B4J244 114 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 K7EIM0 57 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 EI24O14681 340 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 ST8SIA3O43173 380 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 YIF1AO95070 293 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 CTSGP08311 255 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 TMEM50BP56557 158 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-211ENST00000522802 WT1-ASQ06250 92 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 P2RY14Q15391 338 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 Q56UQ5 140 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 C1orf100Q5SVJ3 147 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 UBE2UQ5VVX9 321 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 Q75L30 129 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 VSTM2AQ8TAG5 236 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 TCTEX1D2Q8WW35 142 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 GFI1Q99684 422 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 GINS4Q9BRT9 223 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 BABAM2Q9NXR7 383 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 SMPD3Q9NY59 655 aaPredicted RBP4.39□□□□□ -1.71
VPS13B-211ENST00000522802 XCL2Q9UBD3 114 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 CLEC2DQ9UHP7 191 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 MRPS7Q9Y2R9 242 aaKnown RBP4.39□□□□□ -1.71
VPS13B-211ENST00000522802 KCNK7Q9Y2U2 307 aa4.39□□□□□ -1.71
VPS13B-211ENST00000522802 TRAV14DV4A0A0A6YYC5 116 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 TRAV2A0A0B4J234 112 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 IGKV1D-13A0A0B4J2D9 117 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 DNASE2O00115 360 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 ZNF705DP0CH99 300 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 ZNF705BP0CI00 300 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 IGKV1-13P0DP09 117 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 KRTAP10-1P60331 282 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 PAFAH1B2P68402 229 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 ARL16Q0P5N6 197 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 EIF4EBP1Q13541 118 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 TMPRSS11AQ6ZMR5 421 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 ZNF705AQ6ZN79 300 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 CBR4Q8N4T8 237 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 FAM89BQ8N5H3 189 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 ZNF485Q8NCK3 441 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 DGCR14Q96DF8 476 aaKnown RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 NIPSNAP3BQ9BS92 247 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 VSIRQ9H7M9 311 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 FGF20Q9NP95 211 aaPredicted RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 THYN1Q9P016 225 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 SPATA2Q9UM82 520 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 RBMX2Q9Y388 322 aaKnown RBP4.38□□□□□ -1.71
VPS13B-211ENST00000522802 PRELID3BQ9Y3B1 194 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 LINC00588Q9Y4M8 146 aa4.38□□□□□ -1.71
VPS13B-211ENST00000522802 K7EQG2 157 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 WBP4O75554 376 aaKnown RBP4.37□□□□□ -1.71
VPS13B-211ENST00000522802 DIRAS3O95661 229 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 IGHV3-48P01763 117 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 SERPINE2P07093 398 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 OR13C7P0DN81 318 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 CD36P16671 472 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 TAS2R43P59537 309 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 RBM48Q5RL73 367 aaKnown RBP4.37□□□□□ -1.71
VPS13B-211ENST00000522802 SLC25A24Q6NUK1 477 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 ZNF773Q6PK81 442 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 SMIM29Q86T20 159 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 CCDC190Q86UF4 302 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 C15orf53Q8NAA6 179 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 STXBP6Q8NFX7 210 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 RHOXF1Q8NHV9 184 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 DCANP1Q8TF63 244 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 HRASLSQ9HDD0 168 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 ARGLU1Q9NWB6 273 aaPredicted RBP4.37□□□□□ -1.71
VPS13B-211ENST00000522802 BET1LQ9NYM9 111 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 TAS2R8Q9NYW2 309 aa4.37□□□□□ -1.71
VPS13B-211ENST00000522802 F11RQ9Y624 299 aaKnown RBP4.37□□□□□ -1.71
VPS13B-211ENST00000522802 IGHV3OR16-12A0A075B7B8 117 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 TMEM189A5PLL7 270 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 TNFSF12O43508 249 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 CDK1P06493 297 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 MYL12AP19105 171 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 NFYAP23511 347 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-211ENST00000522802 PSMG4Q5JS54 123 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 TTC23Q5W5X9 447 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 TOMM20LQ6UXN7 152 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 Q6ZRN7 208 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-211ENST00000522802 CENPNQ96H22 339 aaPredicted RBP4.36□□□□□ -1.71
VPS13B-211ENST00000522802 Q96MT0 163 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 ATP6V0BQ99437 205 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 URM1Q9BTM9 101 aaKnown RBP4.36□□□□□ -1.71
VPS13B-211ENST00000522802 COMMD5Q9GZQ3 224 aa4.36□□□□□ -1.71
VPS13B-211ENST00000522802 NXF2Q9GZY0 626 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms