RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948	CIB3	Q96Q77	187 aa	Predicted RBP	13.87	□□□□□ -0.19
VEGFA-222	ENST00000520948	TXN2	Q99757	166 aa		13.87	□□□□□ -0.19
VEGFA-222	ENST00000520948	GSKIP	Q9P0R6	139 aa		13.87	□□□□□ -0.19
VEGFA-222	ENST00000520948	C5orf51	A6NDU8	294 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	C15orf62	A8K5M9	175 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	FAM25E	A8MYX2	175 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	WRB	O00258	174 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	GGCT	O75223	188 aa	Known RBP	13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	TMEM50A	O95807	157 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	IFNA10	P01566	189 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	ARL3	P36405	182 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	PINX1	Q96BK5	328 aa	Known RBP	13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	ZNF414	Q96IQ9	312 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	SMIM8	Q96KF7	97 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	ALG5	Q9Y673	324 aa		13.86	□□□□□ -0.19
VEGFA-222	ENST00000520948	CTSG	P08311	255 aa		13.85	□□□□□ -0.19
VEGFA-222	ENST00000520948	MFAP4	P55083	255 aa		13.85	□□□□□ -0.19
VEGFA-222	ENST00000520948	GPHB5	Q86YW7	130 aa		13.85	□□□□□ -0.19
VEGFA-222	ENST00000520948	C11orf1	Q9H5F2	150 aa		13.85	□□□□□ -0.19
VEGFA-222	ENST00000520948	RCL1	Q9Y2P8	373 aa	Known RBP	13.85	□□□□□ -0.19
VEGFA-222	ENST00000520948	OVOL1	O14753	267 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	TGOLN2	O43493	480 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	OR2C1	O95371	312 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	SIX6	O95475	246 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	IGHV3-48	P01763	117 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	GPR183	P32249	361 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	ADM	P35318	185 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	RPEL1	Q2QD12	228 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	SPSB3	Q6PJ21	355 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	BSCL2	Q96G97	398 aa	Predicted RBP	13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	OR4C12	Q96R67	309 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	CHRDL1	Q9BU40	450 aa		13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	MCRIP2	Q9BUT9	160 aa	Known RBP	13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	MRPL36	Q9P0J6	103 aa	Known RBP	13.84	□□□□□ -0.19
VEGFA-222	ENST00000520948	OR2T8	A6NH00	312 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	PRSS46	E5RG02	174 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	GOSR2	O14653	212 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	OPRK1	P41145	380 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	H2BFS	P57053	126 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	TAS2R30	P59541	319 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	OR4X1	Q8NH49	305 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	RAB40C	Q96S21	281 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	NMES1	Q9C002	83 aa		13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	GAR1	Q9NY12	217 aa	Known RBP	13.83	□□□□□ -0.2
VEGFA-222	ENST00000520948	TENM3	Q9P273	2699 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	PMS2P5	A8MQ11	134 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948		K7EPK0	472 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	LGALS9	O00182	355 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	SSNA1	O43805	119 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	SSSCA1	O60232	199 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	SCGB1D2	O95969	90 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	SYNJ2BP	P57105	145 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	RPP30	P78346	268 aa	Known RBP	13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948		Q56UQ5	140 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	ACSM6	Q6P461	480 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	PRSS54	Q6PEW0	395 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	IL34	Q6ZMJ4	242 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	WDR89	Q96FK6	387 aa	Predicted RBP	13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	PSENEN	Q9NZ42	101 aa		13.82	□□□□□ -0.2
VEGFA-222	ENST00000520948	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	SLC25A4	P12235	298 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	GPX4	P36969	197 aa	Predicted RBP	13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	NPBWR1	P48145	328 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	RAB11A	P62491	216 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	RAB32	Q13637	225 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	SPANXN5	Q5MJ07	72 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	ETFRF1	Q6IPR1	90 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	TMEM116	Q8NCL8	245 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	ZC4H2	Q9NQZ6	224 aa		13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	STRAP	Q9Y3F4	350 aa	Known RBP	13.81	□□□□□ -0.2
VEGFA-222	ENST00000520948	TSC22D2	O75157	780 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	CLN5	O75503	358 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	IFNA4	P05014	189 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	CYCS	P99999	105 aa	Known RBP	13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	TMEM14EP	Q6UXP3	125 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	UBAC2	Q8NBM4	344 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	OR9G4	Q8NGQ1	327 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	CACNG8	Q8WXS5	425 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	PRR25	Q96S07	402 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	MGAT4C	Q9UBM8	478 aa		13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948	LSM5	Q9Y4Y9	91 aa	Known RBP	13.8	□□□□□ -0.2
VEGFA-222	ENST00000520948		H3BP45	60 aa		13.79	□□□□□ -0.2
VEGFA-222	ENST00000520948	GNG7	O60262	68 aa		13.79	□□□□□ -0.2
VEGFA-222	ENST00000520948	FAM106A	Q4KMX7	169 aa		13.79	□□□□□ -0.2
VEGFA-222	ENST00000520948		U3KQK5	164 aa		13.79	□□□□□ -0.2
VEGFA-222	ENST00000520948	SEC14L6	B5MCN3	397 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	NDUFA4	O00483	81 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	NUPL2	O15504	423 aa	Known RBP	13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	CSN3	P07498	182 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	CXCL3	P19876	107 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	INSL3	P51460	131 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	GAMT	Q14353	236 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	C9orf66	Q5T8R8	295 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	UNQ9165/PRO28630	Q6UXU0	137 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	SLC16A13	Q7RTY0	426 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	SIGLEC8	Q9NYZ4	499 aa		13.78	□□□□□ -0.2
VEGFA-222	ENST00000520948	TRAV30	A0A087WSZ9	112 aa		13.77	□□□□□ -0.21
VEGFA-222	ENST00000520948	IGHV3-35	A0A0C4DH35	117 aa		13.77	□□□□□ -0.21
VEGFA-222	ENST00000520948		A8MWP6	167 aa		13.77	□□□□□ -0.21

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