RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SPATA25Q9BR10 227 aa18.44■□□□□ 0.54
PVT1-204ENST00000517525 C20orf24Q9BUV8 137 aa18.44■□□□□ 0.54
PVT1-204ENST00000517525 DUXBA0A1W2PPF3 345 aa18.43■□□□□ 0.54
PVT1-204ENST00000517525 SCAF4O95104 1147 aaKnown RBP18.43■□□□□ 0.54
PVT1-204ENST00000517525 IGHV3-48P01763 117 aa18.43■□□□□ 0.54
PVT1-204ENST00000517525 DEFB125Q8N687 156 aa18.43■□□□□ 0.54
PVT1-204ENST00000517525 LRTM2Q8N967 370 aa18.43■□□□□ 0.54
PVT1-204ENST00000517525 OR52B4Q8NGK2 314 aa18.43■□□□□ 0.54
PVT1-204ENST00000517525 OR4X1Q8NH49 305 aa18.43■□□□□ 0.54
PVT1-204ENST00000517525 FNDC4Q9H6D8 234 aaPredicted RBP18.43■□□□□ 0.54
PVT1-204ENST00000517525 IGHV7-4-1A0A0J9YVY3 117 aa18.42■□□□□ 0.54
PVT1-204ENST00000517525 LYZL2Q7Z4W2 148 aa18.42■□□□□ 0.54
PVT1-204ENST00000517525 RNASEH2CQ8TDP1 164 aaKnown RBP18.42■□□□□ 0.54
PVT1-204ENST00000517525 HEYLQ9NQ87 328 aaPredicted RBP18.42■□□□□ 0.54
PVT1-204ENST00000517525 HSPB7Q9UBY9 170 aa18.42■□□□□ 0.54
PVT1-204ENST00000517525 RBMY1BA6NDE4 496 aaKnown RBP18.41■□□□□ 0.54
PVT1-204ENST00000517525 RBMY1EA6NEQ0 496 aaKnown RBP18.41■□□□□ 0.54
PVT1-204ENST00000517525 CLN5O75503 358 aa18.41■□□□□ 0.54
PVT1-204ENST00000517525 RBMY1DP0C7P1 496 aaKnown RBP18.41■□□□□ 0.54
PVT1-204ENST00000517525 SMCO1Q147U7 214 aa18.41■□□□□ 0.54
PVT1-204ENST00000517525 ZNF600Q6ZNG1 722 aa18.41■□□□□ 0.54
PVT1-204ENST00000517525 CITED4Q96RK1 184 aa18.41■□□□□ 0.54
PVT1-204ENST00000517525 FAM110AQ9BQ89 295 aa18.41■□□□□ 0.54
PVT1-204ENST00000517525 SRD5A3Q9H8P0 318 aa18.41■□□□□ 0.54
PVT1-204ENST00000517525 PRR13Q9NZ81 148 aa18.41■□□□□ 0.54
PVT1-204ENST00000517525 A0A1B0GU03 582 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 NAP1L6A6NFF2 107 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 C3orf84H3BNL1 204 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 CHEK1O14757 476 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 TOMM20LQ6UXN7 152 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 NOXA1Q86UR1 476 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 TMEM116Q8NCL8 245 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 GINS3Q9BRX5 216 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 RHPN1-AS1Q9BWJ2 59 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 SELENOKQ9Y6D0 94 aa18.4■□□□□ 0.54
PVT1-204ENST00000517525 IGHV3OR16-8A0A075B7F1 116 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 TRAV14DV4A0A0A6YYC5 116 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 RPS10-NUDT3A0A1W2PQS6 291 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 CEBPZOSA8MTT3 80 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 YIF1AO95070 293 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 CD5P06127 495 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 SLC25A6P12236 298 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 OPRK1P41145 380 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 ATP5IP56385 69 aaPredicted RBP18.39■□□□□ 0.53
PVT1-204ENST00000517525 UBE2MP61081 183 aaKnown RBP18.39■□□□□ 0.53
PVT1-204ENST00000517525 TNFRSF9Q07011 255 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 SLC24A4Q8NFF2 622 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 WFDC10AQ9H1F0 79 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 HIPK2Q9H2X6 1198 aa18.39■□□□□ 0.53
PVT1-204ENST00000517525 MRPL36Q9P0J6 103 aaKnown RBP18.39■□□□□ 0.53
PVT1-204ENST00000517525 NBEAL2Q6ZNJ1 2754 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 TRAV30A0A087WSZ9 112 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 ZNF207O43670 478 aaKnown RBP18.38■□□□□ 0.53
PVT1-204ENST00000517525 SLC25A4P12235 298 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 RBMS2Q15434 407 aaKnown RBP18.38■□□□□ 0.53
PVT1-204ENST00000517525 BAK1Q16611 211 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 TMED4Q7Z7H5 227 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 TMEM170AQ8WVE7 144 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 SDHCQ99643 169 aaPredicted RBP18.38■□□□□ 0.53
PVT1-204ENST00000517525 ZFAND3Q9H8U3 227 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 U3KQ87 197 aa18.38■□□□□ 0.53
PVT1-204ENST00000517525 PITX3O75364 302 aa18.37■□□□□ 0.53
PVT1-204ENST00000517525 SCGB2A1O75556 95 aa18.37■□□□□ 0.53
PVT1-204ENST00000517525 MLANAQ16655 118 aa18.37■□□□□ 0.53
PVT1-204ENST00000517525 FAM90A2PQ658T7 463 aa18.37■□□□□ 0.53
PVT1-204ENST00000517525 VSIRQ9H7M9 311 aa18.37■□□□□ 0.53
PVT1-204ENST00000517525 OR4C46A6NHA9 309 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 SFT2D2O95562 160 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 IGKV1-17P01599 117 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 BMI1P35226 326 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 TRIQKQ629K1 86 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 CENPSQ8N2Z9 138 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 RNF2Q99496 336 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 EDA2RQ9HAV5 297 aa18.36■□□□□ 0.53
PVT1-204ENST00000517525 PUS1Q9Y606 427 aaKnown RBP eCLIP18.36■□□□□ 0.53
PVT1-204ENST00000517525 NPY1RP25929 384 aa18.35■□□□□ 0.53
PVT1-204ENST00000517525 ETFRF1Q6IPR1 90 aa18.35■□□□□ 0.53
PVT1-204ENST00000517525 PRSS54Q6PEW0 395 aa18.35■□□□□ 0.53
PVT1-204ENST00000517525 C7orf50Q9BRJ6 194 aaKnown RBP18.35■□□□□ 0.53
PVT1-204ENST00000517525 TMED3Q9Y3Q3 217 aa18.35■□□□□ 0.53
PVT1-204ENST00000517525 NDUFB6O95139 128 aa18.34■□□□□ 0.53
PVT1-204ENST00000517525 VAMP1P23763 118 aa18.34■□□□□ 0.53
PVT1-204ENST00000517525 PPP1R1AQ13522 171 aa18.34■□□□□ 0.53
PVT1-204ENST00000517525 MUC7Q8TAX7 377 aa18.34■□□□□ 0.53
PVT1-204ENST00000517525 DTD1Q8TEA8 209 aa18.34■□□□□ 0.53
PVT1-204ENST00000517525 FAM90A26D6RGX4 464 aa18.33■□□□□ 0.52
PVT1-204ENST00000517525 IGLC1P0CG04 106 aa18.33■□□□□ 0.52
PVT1-204ENST00000517525 INPP1P49441 399 aa18.33■□□□□ 0.52
PVT1-204ENST00000517525 CMC4P56277 68 aaPredicted RBP18.33■□□□□ 0.52
PVT1-204ENST00000517525 OR1S2Q8NGQ3 325 aa18.33■□□□□ 0.52
PVT1-204ENST00000517525 GGTLC1Q9BX51 225 aa18.33■□□□□ 0.52
PVT1-204ENST00000517525 RBKSQ9H477 322 aa18.33■□□□□ 0.52
PVT1-204ENST00000517525 DNAH7Q8WXX0 4024 aa18.32■□□□□ 0.52
PVT1-204ENST00000517525 YPEL3P61236 119 aaPredicted RBP18.32■□□□□ 0.52
PVT1-204ENST00000517525 ODF3L2Q3SX64 289 aa18.32■□□□□ 0.52
PVT1-204ENST00000517525 OR1S1Q8NH92 325 aa18.32■□□□□ 0.52
PVT1-204ENST00000517525 LOC102724200A0A096LPH7 203 aaPredicted RBP18.31■□□□□ 0.52
PVT1-204ENST00000517525 CRYBB3P26998 211 aa18.31■□□□□ 0.52
PVT1-204ENST00000517525 TMEM231Q9H6L2 316 aa18.31■□□□□ 0.52
PVT1-204ENST00000517525 TRAV2A0A0B4J234 112 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms